RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1101946" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1101946 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29404503 29404503 PRJNA1101946_S_NODE_629_length_551_cov_8.585657_g540_i0 PRJNA1101946 629 551 8.585657 47.30697007 Promineifilum sp. 2664178 Bacteria Bacteria 45.8 0.0423   NR MBX7252243.1 2664178 g540 i0 41.4 0.315789473684211 58 28 28.3 3 298 453 216 273 MBX7252243.1 glycosyltransferase [Promineifilum sp.] diamond 174 45.8 1 Bacteria   Bacillati Chloroflexota Ardenticatenia Candidatus Promineifilales Candidatus Promineifilaceae Candidatus Promineifilum Promineifilum sp.
30952510 30952510 PRJNA1101946_S_NODE_13814_length_216_cov_5.113772_g13715_i0 PRJNA1101946 13814 216 5.113772 11.04574752 Chloroflexota bacterium 2026724 Bacteria Bacteria 42.7 0.00489   NR RLC75609.1 2026724 g13715 i0 41.3 0.638888888888889 46 27 63.9 0 168 31 12 57 RLC75609.1 MAG: hypothetical protein DRJ03_30025, partial [Chloroflexota bacterium] diamond 138 42.7 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;