RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1101946" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1101946 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6589393 6589393 PRJNA1101946_S_NODE_3986_length_330_cov_5.448399_g3887_i0 PRJNA1101946 3986 330 5.448399 17.9797167 Babesia bigemina 5866 SAR_Eukaryotes SAR_Eukaryotes 488 2e-133   NTclustered gi|833494855|ref|XM_012915027.1| 5866 g3887 i0 93.155 1222.11515151515 336 17 100 3 1 330 144 479 Babesia bigemina hypothetical protein, conserved partial mRNA blastn 403298 488 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bigemina
21888069 21888069 PRJNA1101946_S_NODE_16118_length_200_cov_11.602649_g16019_i0 PRJNA1101946 16118 200 11.602649 23.205298 Cystoisospora suis 483139 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.017   NTclustered gi|2795623848|ref|XM_068065954.1| 483139 g16019 i0 100 0.28 28 0 14 0 1 28 2418 2391 Cystoisospora suis morn repeat-containing protein (CSUI_005784), partial mRNA blastn 56 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Cystoisospora Cystoisospora suis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;