RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1101946" and tax_kingdom = "Thermotogati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Thermotogati · 4 ✖

bioproject 1

  • PRJNA1101946 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26878087 26878087 PRJNA1101946_S_NODE_17461_length_192_cov_36.041958_g17362_i0 PRJNA1101946 17461 192 36.041958 69.20055936 Trueperaceae bacterium 2026798 Bacteria Bacteria 42 0.0348   NR TVR86488.1 2026798 g17362 i0 50 0.65625 42 19 62.5 1 136 17 185 226 TVR86488.1 MAG: prepilin peptidase [Trueperaceae bacterium] diamond 126 42 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae   Trueperaceae bacterium
28615200 28615200 PRJNA1101946_S_NODE_14327_length_212_cov_31.245399_g14228_i0 PRJNA1101946 14327 212 31.245399 66.24024588 Trueperaceae bacterium 2026798 Bacteria Bacteria 45.1 0.0037200000000000002   NR TVR86488.1 2026798 g14228 i0 38.7 0.877358490566038 62 32 79.2 2 8 175 165 226 TVR86488.1 MAG: prepilin peptidase [Trueperaceae bacterium] diamond 186 45.1 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae   Trueperaceae bacterium
29025895 29025895 PRJNA1101946_S_NODE_21828_length_172_cov_6.747967_g21729_i0 PRJNA1101946 21828 172 6.747967 11.60650324 Trueperaceae bacterium 2026798 Bacteria Bacteria 42 0.0261   NR TVR86488.1 2026798 g21729 i0 45.2 0.732558139534884 42 21 69.8 1 146 27 185 226 TVR86488.1 MAG: prepilin peptidase [Trueperaceae bacterium] diamond 126 42 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae   Trueperaceae bacterium
32375690 32375690 PRJNA1101946_S_NODE_6779_length_283_cov_33.371795_g6680_i0 PRJNA1101946 6779 283 33.371795 94.44217985 Trueperaceae bacterium 2026798 Bacteria Bacteria 48.1 7.06e-4   NR TVR86488.1 2026798 g6680 i0 41.9 0.657243816254417 62 30 59.4 2 9 176 165 226 TVR86488.1 MAG: prepilin peptidase [Trueperaceae bacterium] diamond 186 48.1 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae   Trueperaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;