RNAquarium Metadata Server
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contig_metadata

12 rows where bioproject = "PRJNA1101946", tax_kingdom = "Metazoa" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 12 ✖

tax_kingdom 1

  • Metazoa · 12 ✖

tax_clade 1

bioproject 1

  • PRJNA1101946 · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
211282 211282 PRJNA1101946_S_NODE_4741_length_315_cov_2.883459_g4642_i0 PRJNA1101946 4741 315 2.883459 9.08289585 Bradybaena similaris 145626 Mollusca Mollusca 54.7 0.008   NTclustered gi|2912981848|dbj|AP039587.1| 145626 g4642 i0 96.97 0.104761904761905 33 0 10 1 242 273 24009057 24009089 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 6, sequence blastn 33 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
4038031 4038031 PRJNA1101946_S_NODE_8464_length_263_cov_5.761682_g8365_i0 PRJNA1101946 8464 263 5.761682 15.15322366 Bradybaena similaris 145626 Mollusca Mollusca 52.8 0.024   NTclustered gi|2912997258|dbj|AP039602.1| 145626 g8365 i0 100 0.106463878326996 28 0 11 0 202 229 53560199 53560172 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 21, sequence blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
11689969 11689969 PRJNA1101946_S_NODE_27030_length_154_cov_4.161905_g26931_i0 PRJNA1101946 27030 154 4.161905 6.4093337 Bradybaena similaris 145626 Mollusca Mollusca 60.2 7.55e-5   NTclustered gi|2912997258|dbj|AP039602.1| 145626 g26931 i0 100 45.5454545454545 32 0 22 0 123 154 5941177 5941208 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 21, sequence blastn 7014 60.2 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
23972178 23972178 PRJNA1101946_S_NODE_20919_length_176_cov_2.811024_g20820_i0 PRJNA1101946 20919 176 2.811024 4.94740224 root 1 Root_unresolved Root_unresolved 54.7 0.004   NTclustered gi|2170965484|dbj|LC593126.1| 148819 g20820 i0 100 0.647727272727273 29 0 16 0 1 29 29 57 Anadara broughtonii GnRH mRNA for gonadotropin releasing hormone, complete cds blastn 114 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Arcoida Arcidae Anadara Anadara broughtonii
27130449 27130449 PRJNA1101946_S_NODE_10002_length_247_cov_12.803030_g9903_i0 PRJNA1101946 10002 247 12.80303 31.6234841 Haliotis asinina 109174 Mollusca Mollusca 43.9 0.0148   NR XP_067657806.1 109174 g9903 i0 35.4 2.35627530364372 65 36 77.7 2 213 22 144 203 XP_067657806.1 uncharacterized protein [Haliotis asinina] diamond 582 43.9 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis asinina
27510152 27510152 PRJNA1101946_S_NODE_23103_length_167_cov_5.796610_g23004_i0 PRJNA1101946 23103 167 5.79661 9.6803387 Ylistrum balloti 509963 Mollusca Mollusca 88.6 6.33e-19   NR XP_060071943.1 509963 g23004 i0 80 2.96407185628743 55 11 98.8 0 1 165 93 147 XP_060071943.1 uncharacterized protein LOC132551815 [Ylistrum balloti] diamond 495 88.6 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Ylistrum Ylistrum balloti
27943486 27943486 PRJNA1101946_S_NODE_27525_length_152_cov_22.844660_g27426_i0 PRJNA1101946 27525 152 22.84466 34.7238832 Metazoa 33208 Mollusca Mollusca 74.3 7.69e-14   NR XP_021339388.1 6573 g27426 i0 74 55.2631578947368 50 13 98.7 0 150 1 88 137 XP_021339388.1 uncharacterized protein LOC110440572 [Mizuhopecten yessoensis] diamond 8400 74.3 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Mizuhopecten Mizuhopecten yessoensis
28953990 28953990 PRJNA1101946_S_NODE_26868_length_154_cov_49.857143_g26769_i0 PRJNA1101946 26868 154 49.857143 76.78000022 Bivalvia 6544 Mollusca Mollusca 66.2 5.52e-11   NR XP_060071943.1 509963 g26769 i0 68.6 55.6363636363636 51 16 99.4 0 1 153 93 143 XP_060071943.1 uncharacterized protein LOC132551815 [Ylistrum balloti] diamond 8568 66.2 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Ylistrum Ylistrum balloti
29309695 29309695 PRJNA1101946_S_NODE_23729_length_165_cov_5.293103_g23630_i0 PRJNA1101946 23729 165 5.293103 8.73361995 Lymnaea stagnalis 6523 Mollusca Mollusca 41.6 0.0341   NR CAL1531800.1 6523 g23630 i0 82.4 0.309090909090909 17 3 30.9 0 106 156 78 94 CAL1531800.1 unnamed protein product, partial [Lymnaea stagnalis] diamond 51 41.6 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lymnaeidae Lymnaea Lymnaea stagnalis
30312235 30312235 PRJNA1101946_S_NODE_10512_length_242_cov_34.051813_g10413_i0 PRJNA1101946 10512 242 34.051813 82.40538746 Metazoa 33208 Mollusca Mollusca 93.6 5.07e-22   NR OWF37074.1 6573 g10413 i0 74.2 3.07438016528926 62 16 76.9 0 3 188 100 161 OWF37074.1 Calmodulin [Mizuhopecten yessoensis] diamond 744 93.6 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Mizuhopecten Mizuhopecten yessoensis
31101489 31101489 PRJNA1101946_S_NODE_28095_length_150_cov_41.564356_g27996_i0 PRJNA1101946 28095 150 41.564356 62.346534 Bivalvia 6544 Mollusca Mollusca 67.8 1.5e-11   NR XP_060071943.1 509963 g27996 i0 72 55 50 14 100 0 1 150 93 142 XP_060071943.1 uncharacterized protein LOC132551815 [Ylistrum balloti] diamond 8250 67.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Ylistrum Ylistrum balloti
32871630 32871630 PRJNA1101946_S_NODE_14200_length_213_cov_24.268293_g14101_i0 PRJNA1101946 14200 213 24.268293 51.69146409 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 70.1 5.24e-12   NR XP_060071943.1 509963 g14101 i0 79.5 1.23943661971831 44 9 62 0 3 134 93 136 XP_060071943.1 uncharacterized protein LOC132551815 [Ylistrum balloti] diamond 264 70.1 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Ylistrum Ylistrum balloti

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;