RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1101946" and tax_clade = "Apusozoa"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Apusozoa · 2 ✖

bioproject 1

  • PRJNA1101946 · 2 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1485938 1485938 PRJNA1101946_S_NODE_2382_length_377_cov_118.143293_g2283_i0 PRJNA1101946 2382 377 118.143293 445.40021461 Multimonas media 1314683 Root_unresolved Root_unresolved 279 1.5100000000000002e-70   NTclustered gi|2206682170|gb|OM966643.1| 1314683 g2283 i0 82.229 88.5570291777188 332 52 87 6 1 329 4653 4326 Multimonas media strain MMROSKO2018 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 33386 279 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Multimonas Multimonas media
29688332 29688332 PRJNA1101946_S_NODE_6510_length_287_cov_4.932773_g6411_i0 PRJNA1101946 6510 287 4.932773 14.15705851 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 46.2 0.00348   NR XP_013755332.1 461836 g6411 i0 41.7 0.627177700348432 60 34 62.7 1 35 214 193 251 XP_013755332.1 uncharacterized protein AMSG_08108 [Thecamonas trahens ATCC 50062] diamond 180 46.2 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;