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contig_metadata

18 rows where bioproject = "PRJNA1101048" and tax_superkingdom = "Viruses"

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tax_kingdom 3

analysis 2

tax_superkingdom 1

  • Viruses · 18 ✖

bioproject 1

  • PRJNA1101048 · 18 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2761898 2761898 PRJNA1101048_P_NODE_2963_length_348_cov_1.134545_g2907_i0 PRJNA1101048 2963 348 1.134545 3.9482166 Betacoronavirus pandemicum 3418604 Viruses Viruses 52.8 0.033   NTclustered gi|2046846597|emb|OU077603.1| 2697049 g2907 i0 100 0.0804597701149425 28 0 8 0 309 336 30030 30003 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 28 52.8 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
2761907 2761907 PRJNA1101048_P_NODE_5923_length_269_cov_2.872449_g5867_i0 PRJNA1101048 5923 269 2.872449 7.72688781 Betacoronavirus pandemicum 3418604 Viruses Viruses 60.2 1.47e-4   NTclustered gi|2046855847|emb|OU086747.1| 2697049 g5867 i0 100 0.234200743494424 32 0 12 0 3 34 29865 29834 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 63 60.2 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
4037931 4037931 PRJNA1101048_P_NODE_5944_length_269_cov_1.403061_g5888_i0 PRJNA1101048 5944 269 1.403061 3.77423409 Phlebovirus limboense 3431643 Viruses Viruses 54.7 0.007   NTclustered gi|2697399720|ref|NC_086346.1| 426786 g5888 i0 100 0.211895910780669 29 0 11 0 241 269 30 2 Frijoles virus isolate VP-161A, complete sequence blastn 57 54.7 1 Viruses   Orthornavirae Negarnaviricota Bunyaviricetes Hareavirales Phenuiviridae Phlebovirus Phlebovirus limboense
5314074 5314074 PRJNA1101048_P_NODE_6025_length_268_cov_1.041026_g5969_i0 PRJNA1101048 6025 268 1.041026 2.78994968 brine shrimp yue-like virus 7 2900459 Viruses Viruses 278 3.72e-70   NTclustered gi|2209095276|gb|OL472842.1| 2900459 g5969 i0 100 5.05597014925373 150 0 99 0 68 217 769 918 MAG: Brine shrimp yue-like virus 7 isolate BH/15 segment 1 RNA-dependent RNA polymerase gene, complete cds blastn 1355 278 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 7
7863910 7863910 PRJNA1101048_P_NODE_5687_length_274_cov_1.398010_g5631_i0 PRJNA1101048 5687 274 1.39801 3.8305474 Lentivirus equinfane 3418648 Viruses Viruses 442 1.2799999999999994e-119   NTclustered gi|9944516|gb|AF247394.1|AF247394 11665 g5631 i0 100 15.5401459854015 239 0 87 0 36 274 3393 3155 Equine infectious anemia virus complete genome blastn 4258 442 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Lentivirus Lentivirus equinfane
7863914 7863914 PRJNA1101048_P_NODE_7027_length_253_cov_0.866667_g6971_i0 PRJNA1101048 7027 253 0.866667 2.19266751 Betacoronavirus pandemicum 3418604 Viruses Viruses 58.4 4.93e-4   NTclustered gi|2046846597|emb|OU077603.1| 2697049 g6971 i0 97.059 11.5810276679842 34 1 13 0 199 232 30032 29999 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 2930 58.4 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
7863921 7863921 PRJNA1101048_P_NODE_9387_length_242_cov_0.923077_g9331_i0 PRJNA1101048 9387 242 0.923077 2.23384634 Betacoronavirus pandemicum 3418604 Viruses Viruses 60.2 1.3e-4   NTclustered gi|2046846597|emb|OU077603.1| 2697049 g9331 i0 100 11.9090909090909 32 0 13 0 7 38 30033 30002 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 2882 60.2 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
8673104 8673104 PRJNA1101048_P_NODE_5807_length_272_cov_0.989950_g5751_i0 PRJNA1101048 5807 272 0.98995 2.692664 Orthornavirae 2732396 Viruses Viruses 52.8 0.025   NTclustered gi|2697399720|ref|NC_086346.1| 426786 g5751 i0 100 0.205882352941176 28 0 10 0 245 272 29 2 Frijoles virus isolate VP-161A, complete sequence blastn 56 52.8 1 Viruses   Orthornavirae Negarnaviricota Bunyaviricetes Hareavirales Phenuiviridae Phlebovirus Phlebovirus limboense
11689925 11689925 PRJNA1101048_P_NODE_8910_length_244_cov_0.912281_g8854_i0 PRJNA1101048 8910 244 0.912281 2.22596564 brine shrimp yue-like virus 7 2900459 Viruses Viruses 374 4.1399999999999986e-99   NTclustered gi|2209095276|gb|OL472842.1| 2900459 g8854 i0 99.512 5.26639344262295 205 1 100 0 40 244 4731 4935 MAG: Brine shrimp yue-like virus 7 isolate BH/15 segment 1 RNA-dependent RNA polymerase gene, complete cds blastn 1285 374 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 7
12965050 12965050 PRJNA1101048_P_NODE_2991_length_346_cov_8.824176_g2935_i0 PRJNA1101048 2991 346 8.824176 30.53164896 Betacoronavirus pandemicum 3418604 Viruses Viruses 58.4 7.04e-4   NTclustered gi|2046846597|emb|OU077603.1| 2697049 g2935 i0 100 8.74277456647399 31 0 9 0 305 335 30004 30034 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 3025 58.4 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
12965062 12965062 PRJNA1101048_P_NODE_7671_length_250_cov_0.881356_g7615_i0 PRJNA1101048 7671 250 0.881356 2.20339 Phlebovirus limboense 3431643 Viruses Viruses 54.7 0.006   NTclustered gi|2697399720|ref|NC_086346.1| 426786 g7615 i0 100 0.228 29 0 12 0 189 217 2 30 Frijoles virus isolate VP-161A, complete sequence blastn 57 54.7 1 Viruses   Orthornavirae Negarnaviricota Bunyaviricetes Hareavirales Phenuiviridae Phlebovirus Phlebovirus limboense
16322323 16322323 PRJNA1101048_P_NODE_6253_length_264_cov_1.403141_g6197_i0 PRJNA1101048 6253 264 1.403141 3.70429224 Orthornavirae 2732396 Viruses Viruses 54.7 0.007   NTclustered gi|2697399720|ref|NC_086346.1| 426786 g6197 i0 100 0.21969696969697 29 0 11 0 1 29 1 29 Frijoles virus isolate VP-161A, complete sequence blastn 58 54.7 1 Viruses   Orthornavirae Negarnaviricota Bunyaviricetes Hareavirales Phenuiviridae Phlebovirus Phlebovirus limboense
19337015 19337015 PRJNA1101048_P_NODE_4756_length_293_cov_1.131818_g4700_i0 PRJNA1101048 4756 293 1.131818 3.31622674 brine shrimp yue-like virus 7 2900459 Viruses Viruses 503 6.24e-138   NTclustered gi|2209095278|gb|OL472843.1| 2900459 g4700 i0 99.636 5.17064846416382 275 1 100 0 1 275 478 204 MAG: Brine shrimp yue-like virus 7 isolate BH/15 segment 2 hypothetical protein gene, complete cds blastn 1515 503 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 7
20612414 20612414 PRJNA1101048_P_NODE_5397_length_279_cov_2.466019_g5341_i0 PRJNA1101048 5397 279 2.466019 6.88019301 Betacoronavirus pandemicum 3418604 Viruses Viruses 54.7 0.007   NTclustered gi|2046855847|emb|OU086747.1| 2697049 g5341 i0 96.875 0.315412186379928 32 1 11 0 1 32 29860 29829 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 88 54.7 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
21888026 21888026 PRJNA1101048_P_NODE_3258_length_336_cov_1.665399_g3202_i0 PRJNA1101048 3258 336 1.665399 5.59574064 Betacoronavirus pandemicum 3418604 Viruses Viruses 56.5 0.002   NTclustered gi|2046855847|emb|OU086747.1| 2697049 g3202 i0 100 0.18452380952381 30 0 9 0 1 30 29861 29832 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 62 56.5 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
21888045 21888045 PRJNA1101048_P_NODE_9818_length_183_cov_1.351562_g9762_i0 PRJNA1101048 9818 183 1.351562 2.47335846 Orthopoxvirus monkeypox 3431483 Viruses Viruses 54.7 0.004   NTclustered gi|2309594316|gb|OP536747.1| 10244 g9762 i0 100 15.8469945355191 29 0 16 0 131 159 119274 119302 Monkeypox virus isolate 9000365, partial genome blastn 2900 54.7 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Orthopoxvirus Orthopoxvirus monkeypox
31553255 31553255 PRJNA1101048_P_NODE_5616_length_275_cov_2.118812_g5560_i0 PRJNA1101048 5616 275 2.118812 5.826733 Hebei betayadokarivirus 3372915 Viruses Viruses 58.9 1.12e-7   NR XHZ00044.1 3372915 g5560 i0 35.6 0.949090909090909 87 54 94.9 1 12 272 730 814 XHZ00044.1 MAG: RNA-dependent RNA polymerase [Hebei betayadokarivirus] diamond 261 58.9 1 Viruses   Orthornavirae Pisuviricota   Yadokarivirales Yadokariviridae Betayadokarivirus Hebei betayadokarivirus
32059111 32059111 PRJNA1101048_P_NODE_7178_length_252_cov_0.871508_g7122_i0 PRJNA1101048 7178 252 0.871508 2.19620016 Ripislos virus 3130921 Viruses Viruses 43.5 0.0227   NR WZH60555.1 3130921 g7122 i0 29.5 0.928571428571429 78 48 84.5 1 238 26 697 774 WZH60555.1 MAG: replicase polyprotein [Ripislos virus] diamond 234 43.5 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Marnaviridae   Ripislos virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;