contig_metadata
12 rows where bioproject = "PRJNA1101048" and tax_phylum = "Fusobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 211221 | 211221 | PRJNA1101048_P_NODE_8101_length_248_cov_0.891429_g8045_i0 | PRJNA1101048 | 8101 | 248 | 0.891429 | 2.21074392 | Leptotrichia buccalis | 40542 | Bacteria | Bacteria | 392 | 1.1599999999999999e-104 | NTclustered | gi|257048753|gb|CP001685.1| | 523794 | g8045 | i0 | 96.996 | 53.0040322580645 | 233 | 7 | 94 | 0 | 7 | 239 | 2001055 | 2001287 | Leptotrichia buccalis DSM 1135, complete genome | blastn | 13145 | 392 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia buccalis | ||
| 1019776 | 1019776 | PRJNA1101048_P_NODE_9021_length_243_cov_1.376471_g8965_i0 | PRJNA1101048 | 9021 | 243 | 1.376471 | 3.34482453 | Cetobacterium | 180162 | Bacteria | Bacteria | 381 | 2.4599999999999995e-101 | NTclustered | gi|2666488225|gb|CP143319.1| | 188913 | g8965 | i0 | 96.137 | 4.79423868312757 | 233 | 9 | 96 | 0 | 11 | 243 | 1913609 | 1913841 | Cetobacterium somerae strain ceto chromosome, complete genome | blastn | 1165 | 381 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 2295314 | 2295314 | PRJNA1101048_P_NODE_7122_length_252_cov_1.709497_g7066_i0 | PRJNA1101048 | 7122 | 252 | 1.709497 | 4.30793244 | Fusobacterium | 848 | Bacteria | Bacteria | 466 | 6.89e-127 | NTclustered | gi|2706074160|gb|CP077112.1| | 76857 | g7066 | i0 | 100 | 49.7103174603175 | 252 | 0 | 100 | 0 | 1 | 252 | 2231864 | 2231613 | Fusobacterium polymorphum strain KCOM1272 chromosome, complete genome | blastn | 12527 | 466 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 3570378 | 3570378 | PRJNA1101048_P_NODE_7463_length_251_cov_0.876404_g7407_i0 | PRJNA1101048 | 7463 | 251 | 0.876404 | 2.19977404 | Fusobacterium | 848 | Bacteria | Bacteria | 442 | 1.1599999999999995e-119 | NTclustered | gi|2269773925|gb|CP100429.1| | 76857 | g7407 | i0 | 98.406 | 98.195219123506 | 251 | 4 | 100 | 0 | 1 | 251 | 846150 | 846400 | Fusobacterium polymorphum strain SSMR1 chromosome, complete genome | blastn | 24647 | 442 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 14239977 | 14239977 | PRJNA1101048_P_NODE_4612_length_296_cov_1.049327_g4556_i0 | PRJNA1101048 | 4612 | 296 | 1.049327 | 3.10600792 | Fusobacterium polymorphum | 76857 | Bacteria | Bacteria | 497 | 2.9399999999999994e-136 | NTclustered | gi|2645882547|gb|CP141278.1| | 76857 | g4556 | i0 | 96.959 | 99.722972972973 | 296 | 9 | 100 | 0 | 1 | 296 | 2080976 | 2080681 | Fusobacterium polymorphum strain 149A chromosome, complete genome | blastn | 29518 | 497 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 14239989 | 14239989 | PRJNA1101048_P_NODE_8212_length_247_cov_0.896552_g8156_i0 | PRJNA1101048 | 8212 | 247 | 0.896552 | 2.21448344 | Fusobacterium vincentii | 155615 | Bacteria | Bacteria | 375 | 1.1699999999999999e-99 | NTclustered | gi|2078814929|gb|CP071093.1| | 155615 | g8156 | i0 | 99.043 | 95.5263157894737 | 209 | 2 | 100 | 0 | 39 | 247 | 374265 | 374473 | Fusobacterium vincentii strain THCT14A3 chromosome, complete genome | blastn | 23595 | 375 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium vincentii | ||
| 16788348 | 16788348 | PRJNA1101048_P_NODE_4494_length_299_cov_1.194690_g4438_i0 | PRJNA1101048 | 4494 | 299 | 1.19469 | 3.5721231 | Fusobacterium polymorphum | 76857 | Bacteria | Bacteria | 477 | 3.8699999999999984e-130 | NTclustered | gi|2706041172|gb|CP056018.1| | 76857 | g4438 | i0 | 100 | 86.7023411371238 | 258 | 0 | 86 | 0 | 9 | 266 | 1273806 | 1273549 | Fusobacterium polymorphum strain SB006 chromosome, complete genome | blastn | 25924 | 477 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 18062902 | 18062902 | PRJNA1101048_P_NODE_8075_length_248_cov_0.891429_g8019_i0 | PRJNA1101048 | 8075 | 248 | 0.891429 | 2.21074392 | Cetobacterium somerae | 188913 | Bacteria | Bacteria | 372 | 1.52e-98 | NTclustered | gi|2201062197|gb|CP092519.1| | 188913 | g8019 | i0 | 94.606 | 6.24193548387097 | 241 | 11 | 96 | 2 | 8 | 246 | 1816387 | 1816627 | Cetobacterium somerae strain CS2105-BJ chromosome, complete genome | blastn | 1548 | 372 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 18871436 | 18871436 | PRJNA1101048_P_NODE_5055_length_287_cov_1.074766_g4999_i0 | PRJNA1101048 | 5055 | 287 | 1.074766 | 3.08457842 | Cetobacterium | 180162 | Bacteria | Bacteria | 366 | 8.34e-97 | NTclustered | gi|2666488225|gb|CP143319.1| | 188913 | g4999 | i0 | 96.804 | 41.4355400696864 | 219 | 7 | 76 | 0 | 69 | 287 | 1859742 | 1859524 | Cetobacterium somerae strain ceto chromosome, complete genome | blastn | 11892 | 366 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 18871437 | 18871437 | PRJNA1101048_P_NODE_6015_length_268_cov_1.200000_g5959_i0 | PRJNA1101048 | 6015 | 268 | 1.2 | 3.216 | Cetobacterium | 180162 | Bacteria | Bacteria | 230 | 1.0599999999999998e-55 | NTclustered | gi|2666490175|gb|CP143320.1| | 188913 | g5959 | i0 | 86.538 | 23.6231343283582 | 208 | 28 | 78 | 0 | 61 | 268 | 561629 | 561422 | Cetobacterium somerae strain ceto plasmid p1, complete sequence | blastn | 6331 | 230 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 19337018 | 19337018 | PRJNA1101048_P_NODE_5436_length_279_cov_1.412621_g5380_i0 | PRJNA1101048 | 5436 | 279 | 1.412621 | 3.94121259 | Cetobacterium somerae | 188913 | Bacteria | Bacteria | 351 | 2.26e-92 | NTclustered | gi|2201062197|gb|CP092519.1| | 188913 | g5380 | i0 | 89.362 | 5.05376344086022 | 282 | 27 | 100 | 2 | 1 | 279 | 1818418 | 1818699 | Cetobacterium somerae strain CS2105-BJ chromosome, complete genome | blastn | 1410 | 351 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 24437098 | 24437098 | PRJNA1101048_P_NODE_5320_length_281_cov_1.500000_g5264_i0 | PRJNA1101048 | 5320 | 281 | 1.5 | 4.215 | Leptotrichia buccalis | 40542 | Bacteria | Bacteria | 501 | 2.14e-137 | NTclustered | gi|257048753|gb|CP001685.1| | 523794 | g5264 | i0 | 99.281 | 2.7900355871886098 | 278 | 1 | 99 | 1 | 2 | 278 | 2355505 | 2355228 | Leptotrichia buccalis DSM 1135, complete genome | blastn | 784 | 501 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia buccalis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;