RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1101048" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1101048 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6122940 6122940 PRJNA1101048_P_NODE_8225_length_247_cov_0.896552_g8169_i0 PRJNA1101048 8225 247 0.896552 2.21448344 Cladosporium 5498 Fungi Fungi 429 8.83e-116   NTclustered gi|284158823|gb|GU214410.1| 29918 g8169 i0 100 66.1862348178138 232 0 94 0 16 247 3015 3246 Cladosporium herbarum strain CBS 723.79 28S large subunit ribosomal RNA gene, partial sequence blastn 16348 429 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium herbarum
7397658 7397658 PRJNA1101048_P_NODE_4746_length_293_cov_1.386364_g4690_i0 PRJNA1101048 4746 293 1.386364 4.06204652 Opisthokonta 33154 Fungi Fungi 58.4 5.84e-4   NTclustered gi|149246384|ref|XM_001527612.1| 36914 g4690 i0 97.143 3.34129692832765 35 0 12 1 75 108 152 186 Lodderomyces elongisporus Protein phosphatase 2C 2 (PTC2), partial mRNA blastn 979 58.4 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Lodderomyces Lodderomyces elongisporus
8673103 8673103 PRJNA1101048_P_NODE_4007_length_311_cov_2.978992_g3951_i0 PRJNA1101048 4007 311 2.978992 9.26466512 Metschnikowia 27320 Fungi Fungi 104 7.91e-18   NTclustered gi|927912810|gb|KR815866.1| 1715865 g3951 i0 91.892 27.2090032154341 74 6 24 0 35 108 234 161 Metschnikowia sp. UFMG-CM-Y3404 26S large subunit ribosomal RNA gene, partial sequence blastn 8462 104 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Metschnikowiaceae Metschnikowia Metschnikowia sp. UFMG-CM-Y3404
15513839 15513839 PRJNA1101048_P_NODE_4393_length_302_cov_0.917031_g4337_i0 PRJNA1101048 4393 302 0.917031 2.76943362 Aspergillus fumigatus 746128 Fungi Fungi 52.8 0.028   NTclustered gi|2279896919|gb|CP097564.1| 746128 g4337 i0 100 0.0927152317880795 28 0 9 0 265 292 828245 828218 Aspergillus fumigatus CEA10 chromosome 2 blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus fumigatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;