RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1101048", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1101048 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12965053 12965053 PRJNA1101048_P_NODE_3991_length_312_cov_1.171548_g3935_i0 PRJNA1101048 3991 312 1.171548 3.65522976 Goussia balatonica 947538 SAR_Eukaryotes SAR_Eukaryotes 357 5.52e-94   NTclustered gi|324022100|gb|GU593717.1| 947538 g3935 i0 95.909 69.025641025641 220 8 70 1 4 222 1787 2006 Goussia balatonica strain 608 28S ribosomal RNA gene, partial sequence blastn 21536 357 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Goussia Goussia balatonica
20612407 20612407 PRJNA1101048_P_NODE_3217_length_338_cov_1.162264_g3161_i0 PRJNA1101048 3217 338 1.162264 3.92845232 Goussia bayae 2303416 SAR_Eukaryotes SAR_Eukaryotes 361 4.669999999999999e-95   NTclustered gi|1450318675|gb|MH758782.1| 2303416 g3161 i0 88.235 84.6272189349112 306 30 89 6 10 311 330 27 Goussia bayae isolate Choptank large subunit ribosomal RNA gene, partial sequence blastn 28604 361 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Goussia Goussia bayae
32808598 32808598 PRJNA1101048_P_NODE_7820_length_249_cov_0.886364_g7764_i0 PRJNA1101048 7820 249 0.886364 2.20704636 Babesia 5864 SAR_Eukaryotes SAR_Eukaryotes 42.7 0.0425   NR GFE53323.1 5869 g7764 i0 40.4 1.13253012048193 47 23 50.6 1 73 198 1233 1279 GFE53323.1 SNF2 family N-terminal domain containing protein [Babesia ovis] diamond 282 42.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;