RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA1101048", tax_clade = "Opisthokonta" and tax_phylum = "Rotifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Rotifera · 8 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 8 ✖

bioproject 1

  • PRJNA1101048 · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4847922 4847922 PRJNA1101048_P_NODE_364_length_800_cov_6.843191_g325_i0 PRJNA1101048 364 800 6.843191 54.745528 Eurotatoria 2816136 Rotifera other_Eukaryota 1160 0   NTclustered gi|72153731|gb|DQ089739.1| 104782 g325 i0 96.464 37.6425 707 18 92 6 34 737 2199 1497 Adineta vaga 28S ribosomal RNA gene, partial sequence blastn 30114 1166 0.994854202401372 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
5314061 5314061 PRJNA1101048_P_NODE_1285_length_481_cov_35.343137_g1230_i0 PRJNA1101048 1285 481 35.343137 170.00048897 Anomopus telphusae 338910 Rotifera other_Eukaryota 448 5.109999999999998e-121   NTclustered gi|72153665|gb|DQ089732.1| 338910 g1230 i0 99.592 92.3887733887734 245 1 100 0 50 294 919 1163 Anomopus telphusae 18S ribosomal RNA gene, complete sequence blastn 44439 448 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Anomopus Anomopus telphusae
12498662 12498662 PRJNA1101048_P_NODE_3850_length_316_cov_22.584362_g3794_i0 PRJNA1101048 3850 316 22.584362 71.36658392 Eurotatoria 2816136 Rotifera other_Eukaryota 496 1.14e-135   NTclustered gi|37785582|gb|AY210469.1| 96448 g3794 i0 99.273 49.1360759493671 275 1 87 1 15 288 1808 1534 Philodina roseola 28S ribosomal RNA gene, partial sequence blastn 15527 497 0.997987927565392 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
16322317 16322317 PRJNA1101048_P_NODE_2273_length_383_cov_2.835484_g2217_i0 PRJNA1101048 2273 383 2.835484 10.85990372 Metazoa 33208 Rotifera other_Eukaryota 442 1.859999999999999e-119   NTclustered gi|37785582|gb|AY210469.1| 96448 g2217 i0 97.328 75.420365535248 262 4 99 2 125 383 1435 1174 Philodina roseola 28S ribosomal RNA gene, partial sequence blastn 28886 442 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
19337016 19337016 PRJNA1101048_P_NODE_5056_length_287_cov_1.070093_g5000_i0 PRJNA1101048 5056 287 1.070093 3.07116691 Philodina megalotrocha 1234259 Rotifera other_Eukaryota 470 6.18e-128   NTclustered gi|1976325515|gb|MW577502.1| 1234259 g5000 i0 96.167 99.595818815331 287 11 100 0 1 287 545 259 Philodina megalotrocha isolate CoSp cytochrome c oxidase subunit I (COX1) gene, partial cds; mitochondrial blastn 28584 470 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina megalotrocha
24437088 24437088 PRJNA1101048_P_NODE_1660_length_435_cov_30.961326_g1604_i0 PRJNA1101048 1660 435 30.961326 134.6817681 Adineta vaga 104782 Rotifera other_Eukaryota 643 5.449999999999998e-180   NTclustered gi|72153731|gb|DQ089739.1| 104782 g1604 i0 97.368 54.064367816092 380 7 97 1 47 423 2410 2789 Adineta vaga 28S ribosomal RNA gene, partial sequence blastn 23518 643 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
26782998 26782998 PRJNA1101048_P_NODE_7581_length_250_cov_1.050847_g7525_i0 PRJNA1101048 7581 250 1.050847 2.6271175 Adineta steineri 433720 Rotifera other_Eukaryota 73.6 5.82e-13   NR CAF1005838.1 433720 g7525 i0 40.7 2.184 91 45 98.4 1 247 2 135 225 CAF1005838.1 unnamed protein product [Adineta steineri] diamond 546 73.6 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri
27974938 27974938 PRJNA1101048_P_NODE_8745_length_245_cov_0.901163_g8689_i0 PRJNA1101048 8745 245 0.901163 2.20784935 Eurotatoria 2816136 Rotifera other_Eukaryota 124 2.55e-31   NR CAF4629788.1 392030 g8689 i0 75.6 17.0204081632653 82 19 99.2 1 2 244 329 410 CAF4629788.1 unnamed protein product, partial [Rotaria magnacalcarata] diamond 4170 124 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria magnacalcarata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;