RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1101048", tax_clade = "Opisthokonta" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA1101048 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1019770 1019770 PRJNA1101048_P_NODE_1181_length_497_cov_1.148585_g1126_i0 PRJNA1101048 1181 497 1.148585 5.70846745 Myxobolidae 35587 Cnidaria other_Eukaryota 213 2.1e-50   NTclustered gi|2663986577|emb|OY756918.1| 59785 g1126 i0 95.522 27.1468812877264 134 5 27 1 12 145 4972 5104 Myxobolus squamalis isolate 71B08 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA complete sequences blastn 13492 215 0.990697674418605 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxobolidae Myxobolus Myxobolus squamalis
18062897 18062897 PRJNA1101048_P_NODE_6295_length_263_cov_2.047368_g6239_i0 PRJNA1101048 6295 263 2.047368 5.38457784 Myxidium streisingeri 1542451 Cnidaria other_Eukaryota 289 1.68e-73   NTclustered gi|681870001|gb|KM001684.1| 1542451 g6239 i0 99.371 4.73764258555133 159 1 93 0 86 244 2208 2050 Myxidium streisingeri clone ZF2 18S small subunit ribosomal RNA gene, partial sequence blastn 1246 289 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxidiidae Myxidium Myxidium streisingeri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;