RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1098727" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1098727 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26719091 26719091 PRJNA1098727_P_NODE_15141_length_163_cov_1.271930_g14900_i0 PRJNA1098727 15141 163 1.27193 2.0732459 Candidatus Poseidoniales archaeon 2163009 Archaea Archaea 84 1.35e-17   NR MEK9695007.1 2163009 g14900 i0 76 0.920245398773006 50 12 92 0 156 7 38 87 MEK9695007.1 GDP-L-fucose synthase [Candidatus Poseidoniales archaeon] diamond 150 84 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales     Candidatus Poseidoniales archaeon
28457381 28457381 PRJNA1098727_P_NODE_15926_length_162_cov_0.902655_g15685_i0 PRJNA1098727 15926 162 0.902655 1.4623011 Candidatus Poseidoniales archaeon 2163009 Archaea Archaea 90.5 7.52e-22   NR MEK9699840.1 2163009 g15685 i0 88.9 0.833333333333333 45 5 83.3 0 135 1 1 45 MEK9699840.1 hypothetical protein [Candidatus Poseidoniales archaeon] diamond 135 90.5 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales     Candidatus Poseidoniales archaeon
32430233 32430233 PRJNA1098727_P_NODE_3359_length_367_cov_1.248428_g3118_i0 PRJNA1098727 3359 367 1.248428 4.58173076 root 1 Root_unresolved Root_unresolved 206 8.29e-63   NR MCJ7489925.1 1906666 g3118 i0 86.7 3.94822888283379 120 16 98.1 0 362 3 276 395 MCJ7489925.1 hypothetical protein [Thermoplasmata archaeon] diamond 1449 206 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;