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contig_metadata

33 rows where bioproject = "PRJNA1098727" and tax_clade = "Sar"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Sar · 33 ✖

bioproject 1

  • PRJNA1098727 · 33 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1485759 1485759 PRJNA1098727_P_NODE_13102_length_168_cov_0.873950_g12861_i0 PRJNA1098727 13102 168 0.87395 1.468236 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 226 7.859999999999997e-55   NTclustered gi|820695469|tpe|LN714488.1| 572307 g12861 i0 91.018 9.59523809523809 167 15 99 0 2 168 300435 300601 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 1612 226 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
1485764 1485764 PRJNA1098727_P_NODE_13662_length_167_cov_0.881356_g13421_i0 PRJNA1098727 13662 167 0.881356 1.47186452 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 300 4.53e-77   NTclustered gi|166046560|emb|CU367677.1| 100861 g13421 i0 99.394 34.5808383233533 165 1 99 0 2 166 191 27 Aphanomyces euteiches cDNA blastn 5775 300 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
2761803 2761803 PRJNA1098727_P_NODE_14523_length_165_cov_0.896552_g14282_i0 PRJNA1098727 14523 165 0.896552 1.4793108 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 213 5.98e-51   NTclustered gi|829194196|ref|XM_001025062.3| 312017 g14282 i0 90.244 0.993939393939394 164 15 99 1 2 164 253 90 Tetrahymena thermophila SB210 40S ribosomal protein S24 partial mRNA blastn 164 213 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
4037808 4037808 PRJNA1098727_P_NODE_13324_length_168_cov_0.873950_g13083_i0 PRJNA1098727 13324 168 0.87395 1.468236 Albugo laibachii 653948 SAR_Eukaryotes SAR_Eukaryotes 309 7.58e-80   NTclustered gi|325194231|emb|FR825088.1| 890382 g13083 i0 100 1.46428571428571 167 0 99 0 1 167 1254 1088 Albugo laibachii Nc14, genomic contig CONTIG_1612_NC14_v4_1853_85 blastn 246 309 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
4037850 4037850 PRJNA1098727_P_NODE_9464_length_198_cov_1.040268_g9223_i0 PRJNA1098727 9464 198 1.040268 2.05973064 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 112 1.78e-30   NR KAG1692638.1 4784 g9223 i0 86.2 1089.24242424242 65 9 98.5 0 197 3 29 93 KAG1692638.1 Alpha-glucosides permease mph3, partial [Phytophthora capsici] diamond 215670 112 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora capsici
5313977 5313977 PRJNA1098727_P_NODE_6425_length_247_cov_1.510101_g6184_i0 PRJNA1098727 6425 247 1.510101 3.72994947 Cyclotella cryptica 29204 SAR_Eukaryotes SAR_Eukaryotes 444 3.15e-120   NTclustered gi|2589355395|ref|NC_077461.1| 29204 g6184 i0 99.187 199.072874493927 246 2 99 0 1 246 71465 71710 Cyclotella cryptica chloroplast, complete genome blastn 49171 444 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclotella Cyclotella cryptica
6589194 6589194 PRJNA1098727_P_NODE_10806_length_184_cov_1.525926_g10565_i0 PRJNA1098727 10806 184 1.525926 2.80770384 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 309 8.430000000000001e-80   NTclustered gi|829174498|ref|XM_001017626.3| 312017 g10565 i0 97.253 7.92391304347826 182 5 99 0 2 183 511 330 Tetrahymena thermophila SB210 ubiquitin/ribosomal fusion protein, putative partial mRNA blastn 1458 309 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
6589212 6589212 PRJNA1098727_P_NODE_13846_length_166_cov_1.384615_g13605_i0 PRJNA1098727 13846 166 1.384615 2.2984609 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 176 7.91e-40   NTclustered gi|829160192|ref|XM_001012283.3| 312017 g13605 i0 89.362 1.36746987951807 141 13 84 2 2 141 68 207 Tetrahymena thermophila SB210 40S ribosomal protein S28e, putative partial mRNA blastn 227 176 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
7397623 7397623 PRJNA1098727_P_NODE_13706_length_167_cov_0.881356_g13465_i0 PRJNA1098727 13706 167 0.881356 1.47186452 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 307 2.71e-79   NTclustered gi|1621572405|gb|MH051920.1| 5893 g13465 i0 100 99.4011976047904 166 0 99 0 2 167 1280 1445 Tetrahymena borealis strain 1630/5A small subunit ribosomal RNA gene, partial sequence blastn 16600 307 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena borealis
7863811 7863811 PRJNA1098727_P_NODE_14287_length_165_cov_1.034483_g14046_i0 PRJNA1098727 14287 165 1.034483 1.70689695 Cyclotella cryptica 29204 SAR_Eukaryotes SAR_Eukaryotes 292 7.47e-75   NTclustered gi|2589355395|ref|NC_077461.1| 29204 g14046 i0 98.78 146.678787878788 164 2 99 0 1 164 80209 80372 Cyclotella cryptica chloroplast, complete genome blastn 24202 292 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclotella Cyclotella cryptica
12498631 12498631 PRJNA1098727_P_NODE_14190_length_165_cov_2.189655_g13949_i0 PRJNA1098727 14190 165 2.189655 3.61293075 Vorticella 60849 SAR_Eukaryotes SAR_Eukaryotes 291 2.69e-74   NTclustered gi|115353907|gb|DQ868347.1| 77619 g13949 i0 98.773 99.2181818181818 163 2 99 0 2 164 625 787 Vorticella microstoma 18S small subunit ribosomal RNA gene, partial sequence blastn 16371 291 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella microstoma
16788206 16788206 PRJNA1098727_P_NODE_12934_length_169_cov_0.866667_g12693_i0 PRJNA1098727 12934 169 0.866667 1.46466723 Spumella sp. OF-40 1432661 SAR_Eukaryotes SAR_Eukaryotes 237 3.63e-58   NTclustered gi|677286268|gb|KF997856.1| 1432661 g12693 i0 92.216 30.9289940828402 167 13 99 0 2 168 1255 1089 Spumella sp. OF-40 translation elongation factor 1-alpha (EF1A) mRNA, complete cds blastn 5227 237 1 Eukaryota Sar     Chrysophyceae Chromulinales Chromulinaceae Spumella Spumella sp. OF-40
23163427 23163427 PRJNA1098727_P_NODE_14559_length_165_cov_0.896552_g14318_i0 PRJNA1098727 14559 165 0.896552 1.4793108 Stephanocyclus meneghinianus 29205 SAR_Eukaryotes SAR_Eukaryotes 276 7.52e-70   NTclustered gi|2728412634|gb|OR666648.1| 29205 g14318 i0 96.951 82 164 5 99 0 2 165 35096 35259 Stephanocyclus meneghinianus chloroplast, complete genome blastn 13530 276 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Thalassiosiraceae Stephanocyclus Stephanocyclus meneghinianus
25246174 25246174 PRJNA1098727_P_NODE_6260_length_251_cov_1.009901_g6019_i0 PRJNA1098727 6260 251 1.009901 2.53485151 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 296 9.52e-76   NTclustered gi|2728412634|gb|OR666648.1| 29205 g6019 i0 89.407 176.713147410359 236 24 94 1 2 237 69845 69611 Stephanocyclus meneghinianus chloroplast, complete genome blastn 44355 296 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Thalassiosiraceae Stephanocyclus Stephanocyclus meneghinianus
26687758 26687758 PRJNA1098727_P_NODE_9901_length_193_cov_1.034722_g9660_i0 PRJNA1098727 9901 193 1.034722 1.99701346 Cyclotella cryptica 29204 SAR_Eukaryotes SAR_Eukaryotes 118 3.81e-29   NR KAL3784137.1 29204 g9660 i0 87.3 0.979274611398964 63 8 97.9 0 3 191 637 699 KAL3784137.1 hypothetical protein HJC23_005795 [Cyclotella cryptica] diamond 189 118 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclotella Cyclotella cryptica
26814598 26814598 PRJNA1098727_P_NODE_14881_length_164_cov_0.904348_g14640_i0 PRJNA1098727 14881 164 0.904348 1.48313072 Cyclotella cryptica 29204 SAR_Eukaryotes SAR_Eukaryotes 64.3 3.11e-10   NR KAL3794402.1 29204 g14640 i0 85.7 0.640243902439024 35 5 64 0 3 107 481 515 KAL3794402.1 hypothetical protein HJC23_012939 [Cyclotella cryptica] diamond 105 64.3 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclotella Cyclotella cryptica
27320605 27320605 PRJNA1098727_P_NODE_12003_length_174_cov_1.248000_g11762_i0 PRJNA1098727 12003 174 1.248 2.17152 Cyclotella cryptica 29204 SAR_Eukaryotes SAR_Eukaryotes 80.9 3.34e-16   NR KAL3777777.1 29204 g11762 i0 90.2 0.706896551724138 41 4 70.7 0 124 2 219 259 KAL3777777.1 hypothetical protein HJC23_008894 [Cyclotella cryptica] diamond 123 80.9 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclotella Cyclotella cryptica
27478450 27478450 PRJNA1098727_P_NODE_15263_length_163_cov_0.912281_g15022_i0 PRJNA1098727 15263 163 0.912281 1.48701803 Stephanodiscus triporus 2934178 SAR_Eukaryotes SAR_Eukaryotes 88.2 1.23e-18   NR KAL3804780.1 2934178 g15022 i0 70.4 0.993865030674847 54 16 99.4 0 162 1 530 583 KAL3804780.1 hypothetical protein ACHAW5_001887 [Stephanodiscus triporus] diamond 162 88.2 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Stephanodiscus Stephanodiscus triporus
27636458 27636458 PRJNA1098727_P_NODE_9704_length_195_cov_1.376712_g9463_i0 PRJNA1098727 9704 195 1.376712 2.6845884 Ochromonadaceae sp. CCMP2298 483371 SAR_Eukaryotes SAR_Eukaryotes 92.8 8.85e-22   NR KAJ1423742.1 483371 g9463 i0 67.8 0.907692307692308 59 19 90.8 0 3 179 124 182 KAJ1423742.1 Tim17/Tim22/Tim23/Pmp24 family-domain-containing protein [Ochromonadaceae sp. CCMP2298] diamond 177 92.8 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae   Ochromonadaceae sp. CCMP2298
28046761 28046761 PRJNA1098727_P_NODE_15745_length_162_cov_0.920354_g15504_i0 PRJNA1098727 15745 162 0.920354 1.49097348 Cyclotella cryptica 29204 SAR_Eukaryotes SAR_Eukaryotes 99 1.92e-22   NR KAL3786440.1 29204 g15504 i0 88.5 0.962962962962963 52 6 96.3 0 5 160 1701 1752 KAL3786440.1 hypothetical protein HJC23_011021 [Cyclotella cryptica] diamond 156 99 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclotella Cyclotella cryptica
28994288 28994288 PRJNA1098727_P_NODE_14648_length_164_cov_1.782609_g14407_i0 PRJNA1098727 14648 164 1.782609 2.92347876 Cyclotella cryptica 29204 SAR_Eukaryotes SAR_Eukaryotes 57 1.18e-7   NR KAL3776376.1 29204 g14407 i0 89.3 1.02439024390244 28 3 51.2 0 3 86 1007 1034 KAL3776376.1 hypothetical protein HJC23_010212 [Cyclotella cryptica] diamond 168 57 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclotella Cyclotella cryptica
29341411 29341411 PRJNA1098727_P_NODE_15549_length_162_cov_1.663717_g15308_i0 PRJNA1098727 15549 162 1.663717 2.69522154 Cyclotella cryptica 29204 SAR_Eukaryotes SAR_Eukaryotes 81.6 2.35e-16   NR KAL3781033.1 29204 g15308 i0 73.6 0.981481481481482 53 14 98.1 0 2 160 338 390 KAL3781033.1 hypothetical protein HJC23_007929 [Cyclotella cryptica] diamond 159 81.6 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclotella Cyclotella cryptica
29467282 29467282 PRJNA1098727_P_NODE_15750_length_162_cov_0.920354_g15509_i0 PRJNA1098727 15750 162 0.920354 1.49097348 Thalassiosira oceanica 159749 SAR_Eukaryotes SAR_Eukaryotes 74.3 8.82e-14   NR EJK61660.1 159749 g15509 i0 66 1.96296296296296 53 18 98.1 0 3 161 542 594 EJK61660.1 hypothetical protein THAOC_17811 [Thalassiosira oceanica] diamond 318 74.3 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Thalassiosiraceae Thalassiosira Thalassiosira oceanica
29846544 29846544 PRJNA1098727_P_NODE_15551_length_162_cov_1.637168_g15310_i0 PRJNA1098727 15551 162 1.637168 2.65221216 Ochromonadaceae sp. CCMP2298 483371 SAR_Eukaryotes SAR_Eukaryotes 54.3 1.05e-6   NR KAJ1407447.1 483371 g15310 i0 53.7 1 54 24 98.1 1 4 162 446 499 KAJ1407447.1 hypothetical protein B484DRAFT_423651 [Ochromonadaceae sp. CCMP2298] diamond 162 54.3 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae   Ochromonadaceae sp. CCMP2298
30352552 30352552 PRJNA1098727_P_NODE_15872_length_162_cov_0.920354_g15631_i0 PRJNA1098727 15872 162 0.920354 1.49097348 Cyclotella cryptica 29204 SAR_Eukaryotes SAR_Eukaryotes 57.4 8.31e-8   NR KAL3786440.1 29204 g15631 i0 76.3 0.703703703703704 38 9 70.4 0 48 161 1110 1147 KAL3786440.1 hypothetical protein HJC23_011021 [Cyclotella cryptica] diamond 114 57.4 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclotella Cyclotella cryptica
30415534 30415534 PRJNA1098727_P_NODE_10313_length_189_cov_1.378571_g10072_i0 PRJNA1098727 10313 189 1.378571 2.60549919 Cyclotella cryptica 29204 SAR_Eukaryotes SAR_Eukaryotes 75.9 3.77e-14   NR KAL3790472.1 29204 g10072 i0 82.2 0.714285714285714 45 8 71.4 0 188 54 44 88 KAL3790472.1 hypothetical protein HJC23_012028 [Cyclotella cryptica] diamond 135 75.9 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclotella Cyclotella cryptica
31458271 31458271 PRJNA1098727_P_NODE_15816_length_162_cov_0.920354_g15575_i0 PRJNA1098727 15816 162 0.920354 1.49097348 Thalassiosira pseudonana 35128 SAR_Eukaryotes SAR_Eukaryotes 84.7 1.95e-17   NR ACA60901.1 35128 g15575 i0 71.7 0.981481481481482 53 15 98.1 0 2 160 1287 1339 ACA60901.1 pol protein, partial [Thalassiosira pseudonana] diamond 159 84.7 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Thalassiosiraceae Thalassiosira Thalassiosira pseudonana
31647700 31647700 PRJNA1098727_P_NODE_11877_length_175_cov_1.325397_g11636_i0 PRJNA1098727 11877 175 1.325397 2.31944475 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 41.6 0.04   NR XP_001006991.2 312017 g11636 i0 36.2 0.994285714285714 58 37 99.4 0 175 2 2464 2521 XP_001006991.2 bowman-birk serine protease inhibitor family protein [Tetrahymena thermophila SB210] diamond 174 41.6 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
32059106 32059106 PRJNA1098727_P_NODE_14898_length_164_cov_0.904348_g14657_i0 PRJNA1098727 14898 164 0.904348 1.48313072 Cyclotella cryptica 29204 SAR_Eukaryotes SAR_Eukaryotes 77.4 5.42e-15   NR KAL3796948.1 29204 g14657 i0 79.2 0.969512195121951 53 11 97 0 161 3 229 281 KAL3796948.1 hypothetical protein HJC23_000701 [Cyclotella cryptica] diamond 159 77.4 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclotella Cyclotella cryptica
32145439 32145439 PRJNA1098727_P_NODE_12558_length_170_cov_0.809917_g12317_i0 PRJNA1098727 12558 170 0.809917 1.3768589 root 1 Root_unresolved Root_unresolved 83.2 7.74e-17   NR KAL3802339.1 29204 g12317 i0 72.2 1.92352941176471 54 15 95.3 0 169 8 1069 1122 KAL3802339.1 hypothetical protein HJC23_007164 [Cyclotella cryptica] diamond 327 83.2 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclotella Cyclotella cryptica
32533956 32533956 PRJNA1098727_P_NODE_13339_length_168_cov_0.873950_g13098_i0 PRJNA1098727 13339 168 0.87395 1.468236 Cyclotella cryptica 29204 SAR_Eukaryotes SAR_Eukaryotes 96.7 8.91e-22   NR KAL3797257.1 29204 g13098 i0 75.9 0.964285714285714 54 13 96.4 0 165 4 309 362 KAL3797257.1 hypothetical protein HJC23_004549 [Cyclotella cryptica] diamond 162 96.7 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclotella Cyclotella cryptica
32597026 32597026 PRJNA1098727_P_NODE_8580_length_210_cov_1.155280_g8339_i0 PRJNA1098727 8580 210 1.15528 2.426088 Cyclotella cryptica 29204 SAR_Eukaryotes SAR_Eukaryotes 64.7 4.54e-10   NR KAL3785736.1 29204 g8339 i0 68.2 0.628571428571429 44 14 62.9 0 168 37 1 44 KAL3785736.1 hypothetical protein HJC23_006305 [Cyclotella cryptica] diamond 132 64.7 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclotella Cyclotella cryptica
32785674 32785674 PRJNA1098727_P_NODE_13680_length_167_cov_0.881356_g13439_i0 PRJNA1098727 13680 167 0.881356 1.47186452 Cyclotella cryptica 29204 SAR_Eukaryotes SAR_Eukaryotes 75.5 3.8e-14   NR KAL3786440.1 29204 g13439 i0 82.6 0.826347305389222 46 5 77.2 1 36 164 640 685 KAL3786440.1 hypothetical protein HJC23_011021 [Cyclotella cryptica] diamond 138 75.5 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclotella Cyclotella cryptica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;