RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1098727", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Elulimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Elulimicrobiota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA1098727 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28741420 28741420 PRJNA1098727_P_NODE_9947_length_192_cov_1.811189_g9706_i0 PRJNA1098727 9947 192 1.811189 3.47748288 Candidatus Elulimicrobium humile 2802965 Bacteria Bacteria 94 1.49e-23   NR NBP58003.1 2802965 g9706 i0 95.7 0.71875 46 2 71.9 0 55 192 1 46 NBP58003.1 hypothetical protein [Candidatus Elulimicrobium humile] diamond 138 94 1 Bacteria Bacteria candidate phyla   Candidatus Elulimicrobiota Candidatus Elulimicrobia Candidatus Elulimicrobiales Candidatus Elulimicrobiaceae Candidatus Elulimicrobium Candidatus Elulimicrobium humile
29372931 29372931 PRJNA1098727_P_NODE_15569_length_162_cov_1.380531_g15328_i0 PRJNA1098727 15569 162 1.380531 2.23646022 Candidatus Elulimicrobium humile 2802965 Bacteria Bacteria 60.5 5.03e-9   NR NBP58002.1 2802965 g15328 i0 65.9 0.759259259259259 41 14 75.9 0 39 161 237 277 NBP58002.1 hypothetical protein [Candidatus Elulimicrobium humile] diamond 123 60.5 1 Bacteria Bacteria candidate phyla   Candidatus Elulimicrobiota Candidatus Elulimicrobia Candidatus Elulimicrobiales Candidatus Elulimicrobiaceae Candidatus Elulimicrobium Candidatus Elulimicrobium humile

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;