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contig_metadata

27 rows where bioproject = "PRJNA1097627" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 27 ✖

bioproject 1

  • PRJNA1097627 · 27 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
208550 208550 PRJNA1097627_P_NODE_4801_length_509_cov_2.561927_g4514_i0 PRJNA1097627 4801 509 2.561927 13.04020843 Harmonia axyridis virus 1 2654694 Viruses Viruses 928 0   NTclustered gi|1767893575|gb|MK729664.1| 2654694 g4514 i0 99.606 0.99803536345776 508 2 99 0 1 508 2547 2040 Harmonia axyridis virus 1 strain SDAU1 ORF1 and ORF2 genes, complete cds blastn 508 928 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Harmonia axyridis virus 1
1019666 1019666 PRJNA1097627_P_NODE_145361_length_250_cov_0.870056_g145068_i0 PRJNA1097627 145361 250 0.870056 2.17514 Orthorubulavirus 2560195 Viruses Viruses 462 8.83e-126   NTclustered gi|1378763606|gb|MF170889.1| 2560580 g145068 i0 100 68 250 0 100 0 1 250 10498 10747 Mammalian orthorubulavirus 5 strain Rigel, complete genome blastn 17000 462 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
2761626 2761626 PRJNA1097627_P_NODE_96783_length_276_cov_1.068966_g96490_i0 PRJNA1097627 96783 276 1.068966 2.95034616 Potyviridae sp. 2681589 Viruses Viruses 499 7.54e-137   NTclustered gi|2697177281|gb|OR867843.1| 2681589 g96490 i0 100 0.978260869565217 270 0 98 0 7 276 5557 5288 MAG: Potyviridae sp. isolate JTYGF13_16/3 genomic sequence blastn 270 499 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Patatavirales Potyviridae   Potyviridae sp.
5310569 5310569 PRJNA1097627_P_NODE_285_length_2057_cov_4.197581_g183_i0 PRJNA1097627 285 2057 4.197581 86.34424117 Harmonia axyridis virus 1 2654694 Viruses Viruses 3747 0   NTclustered gi|1767893575|gb|MK729664.1| 2654694 g183 i0 99.562 2.00145843461351 2057 8 100 1 1 2057 8695 6640 Harmonia axyridis virus 1 strain SDAU1 ORF1 and ORF2 genes, complete cds blastn 4117 3747 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Harmonia axyridis virus 1
6588642 6588642 PRJNA1097627_P_NODE_886_length_992_cov_2.684440_g660_i0 PRJNA1097627 886 992 2.68444 26.6296448 Harmonia axyridis virus 1 2654694 Viruses Viruses 1810 0   NTclustered gi|1767893575|gb|MK729664.1| 2654694 g660 i0 99.597 1 992 4 100 0 1 992 2064 1073 Harmonia axyridis virus 1 strain SDAU1 ORF1 and ORF2 genes, complete cds blastn 992 1810 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Harmonia axyridis virus 1
9947917 9947917 PRJNA1097627_P_NODE_156408_length_248_cov_1.320000_g156115_i0 PRJNA1097627 156408 248 1.32 3.2736 Orthorubulavirus 2560195 Viruses Viruses 459 1.13e-124   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g156115 i0 100 82.4596774193548 248 0 100 0 1 248 2293 2046 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 20450 459 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
10412914 10412914 PRJNA1097627_P_NODE_67649_length_297_cov_3.218750_g67356_i0 PRJNA1097627 67649 297 3.21875 9.5596875 Harmonia axyridis virus 1 2654694 Viruses Viruses 549 8.029999999999997e-152   NTclustered gi|1767893575|gb|MK729664.1| 2654694 g67356 i0 100 1 297 0 100 0 1 297 513 809 Harmonia axyridis virus 1 strain SDAU1 ORF1 and ORF2 genes, complete cds blastn 297 549 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Harmonia axyridis virus 1
11683890 11683890 PRJNA1097627_P_NODE_163970_length_247_cov_0.885057_g163677_i0 PRJNA1097627 163970 247 0.885057 2.18609079 Caudoviricetes sp. 2832643 Viruses Viruses 401 1.9199999999999992e-107   NTclustered gi|2057906957|tpg|BK051254.1| 2832643 g163677 i0 95.951 5 247 10 100 0 1 247 55695 55941 MAG TPA_asm: Caudoviricetes sp. isolate ctgkm6, partial genome blastn 1235 401 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
11689378 11689378 PRJNA1097627_P_NODE_90_length_4234_cov_5.235520_g7_i1 PRJNA1097627 90 4234 5.23552 221.6719168 Gammaretrovirus murleu 3428959 Viruses Viruses 7529 0   NTclustered gi|1071348744|gb|KX173421.1| 11786 g7 i1 98.663 99.371280113368 4262 29 100 10 1 4234 2545 6806 Murine leukemia virus clone 26, complete sequence blastn 420738 7529 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
11689600 11689600 PRJNA1097627_P_NODE_95610_length_276_cov_1.753695_g95317_i0 PRJNA1097627 95610 276 1.753695 4.8401982 Harmonia axyridis virus 1 2654694 Viruses Viruses 483 7.589999999999998e-132   NTclustered gi|1767893575|gb|MK729664.1| 2654694 g95317 i0 98.188 1 276 5 100 0 1 276 6608 6333 Harmonia axyridis virus 1 strain SDAU1 ORF1 and ORF2 genes, complete cds blastn 276 483 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Harmonia axyridis virus 1
14233202 14233202 PRJNA1097627_P_NODE_148692_length_250_cov_0.870056_g148399_i0 PRJNA1097627 148692 250 0.870056 2.17514 Gammaretrovirus gibleu 3428953 Viruses Viruses 462 8.83e-126   NTclustered gi|971888245|gb|KT724047.1| 11840 g148399 i0 100 94.592 250 0 100 0 1 250 5851 6100 Gibbon ape leukemia virus strain San Francisco, complete genome blastn 23648 462 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus gibleu
14233906 14233906 PRJNA1097627_P_NODE_163332_length_247_cov_0.885057_g163039_i0 PRJNA1097627 163332 247 0.885057 2.18609079 Caudoviricetes sp. 2832643 Viruses Viruses 457 4.05e-124   NTclustered gi|2059665777|tpg|BK029014.1| 2832643 g163039 i0 100 31.9595141700405 247 0 100 0 1 247 13046 12800 MAG TPA_asm: Caudoviricetes sp. isolate ctK2j6, partial genome blastn 7894 457 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
15506957 15506957 PRJNA1097627_P_NODE_145253_length_250_cov_0.870056_g144960_i0 PRJNA1097627 145253 250 0.870056 2.17514 Amaranthus caudatus fabavirus 3090866 Viruses Viruses 377 3.29e-100   NTclustered gi|2616762693|gb|OP783967.1| 3090866 g144960 i0 93.976 2.988 249 15 99 0 1 249 4297 4545 Amaranthus caudatus fabavirus isolate BJ-1 segment RNA1, complete sequence blastn 747 377 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Fabavirus Amaranthus caudatus fabavirus
16785023 16785023 PRJNA1097627_P_NODE_334_length_1881_cov_3.530973_g215_i0 PRJNA1097627 334 1881 3.530973 66.41760213 Harmonia axyridis virus 1 2654694 Viruses Viruses 3430 0   NTclustered gi|1767893575|gb|MK729664.1| 2654694 g215 i0 99.575 1 1881 8 100 0 1 1881 6319 4439 Harmonia axyridis virus 1 strain SDAU1 ORF1 and ORF2 genes, complete cds blastn 1881 3430 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Harmonia axyridis virus 1
18056060 18056060 PRJNA1097627_P_NODE_146575_length_250_cov_0.870056_g146282_i0 PRJNA1097627 146575 250 0.870056 2.17514 Caudoviricetes sp. 2832643 Viruses Viruses 364 2.559999999999999e-96   NTclustered gi|2914792039|gb|OR222787.1| 2832643 g146282 i0 93.173 0.996 249 15 99 2 1 248 46201 46448 MAG: Caudoviricetes sp. isolate MSP0571 genomic sequence blastn 249 364 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
18058130 18058130 PRJNA1097627_P_NODE_18975_length_382_cov_1.067961_g18684_i0 PRJNA1097627 18975 382 1.067961 4.07961102 Gammaretrovirus gibleu 3428953 Viruses Viruses 699 0   NTclustered gi|971888245|gb|KT724047.1| 11840 g18684 i0 99.738 27.2879581151832 382 0 100 1 1 382 7981 7601 Gibbon ape leukemia virus strain San Francisco, complete genome blastn 10424 699 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus gibleu
19331288 19331288 PRJNA1097627_P_NODE_171136_length_246_cov_0.890173_g170843_i0 PRJNA1097627 171136 246 0.890173 2.18982558 Caudoviricetes sp. 2832643 Viruses Viruses 73.1 1.71e-8   NTclustered gi|2914933639|gb|OR221620.1| 2832643 g170843 i0 97.619 0.33739837398374 42 1 34 0 1 42 1951 1910 MAG: Caudoviricetes sp. isolate MSP1439 genomic sequence blastn 83 73.1 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
19332822 19332822 PRJNA1097627_P_NODE_202876_length_241_cov_0.916667_g202583_i0 PRJNA1097627 202876 241 0.916667 2.20916747 Potyvirus sp. 1955171 Viruses Viruses 318 1.94e-82   NTclustered gi|2697177299|gb|OR867852.1| 1955171 g202583 i0 100 24.9045643153527 172 0 71 0 64 235 1 172 MAG: Potyvirus sp. isolate JTYGF13_16/282 genomic sequence blastn 6002 318 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Patatavirales Potyviridae Potyvirus Potyvirus sp.
20603569 20603569 PRJNA1097627_P_NODE_107257_length_269_cov_1.336735_g106964_i0 PRJNA1097627 107257 269 1.336735 3.59581715 Tetraparvovirus ungulate1 3052771 Viruses Viruses 492 1.23e-134   NTclustered gi|2277478573|gb|MZ502236.1| 1096141 g106964 i0 99.628 16.907063197026 269 1 100 0 1 269 569 301 Bovine hokovirus 2 isolate BCS1/USA nonstructural protein, minor structural protein, and major structural protein genes, complete cds blastn 4548 492 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Tetraparvovirus Tetraparvovirus ungulate1
21884745 21884745 PRJNA1097627_P_NODE_338_length_1862_cov_3.001118_g217_i0 PRJNA1097627 338 1862 3.001118 55.88081716 Harmonia axyridis virus 1 2654694 Viruses Viruses 3422 0   NTclustered gi|1767893575|gb|MK729664.1| 2654694 g217 i0 99.839 1.0187969924812 1862 3 100 0 1 1862 4376 2515 Harmonia axyridis virus 1 strain SDAU1 ORF1 and ORF2 genes, complete cds blastn 1897 3422 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Harmonia axyridis virus 1
22696653 22696653 PRJNA1097627_P_NODE_10958_length_425_cov_1.156250_g10669_i0 PRJNA1097627 10958 425 1.15625 4.9140625 Betapolyomavirus 1891714 Viruses Viruses 774 0   NTclustered gi|13345942|gb|AF332562.1| 1891767 g10669 i0 99.529 106 425 2 100 0 1 425 3717 3293 Simian virus 40 strain 777, complete genome blastn 45050 780 0.992307692307692 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
22696678 22696678 PRJNA1097627_P_NODE_149258_length_249_cov_2.482955_g148965_i0 PRJNA1097627 149258 249 2.482955 6.18255795 root 1 Root_unresolved Root_unresolved 460 3.16e-125   NTclustered gi|332105|gb|L01464.1|MMTGAGPRO 11757 g148965 i0 100 26.5261044176707 249 0 100 0 1 249 391 143 Mouse mammary tumor virus protease (pro) gene, 3' end blastn 6605 460 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Betaretrovirus Betaretrovirus murmamtum
23157590 23157590 PRJNA1097627_P_NODE_167199_length_247_cov_0.867816_g166906_i0 PRJNA1097627 167199 247 0.867816 2.14350552 Potyvirus sp. 1955171 Viruses Viruses 431 2.45e-116   NTclustered gi|2697177301|gb|OR867853.1| 1955171 g166906 i0 100 1.88259109311741 233 0 94 0 9 241 760 528 MAG: Potyvirus sp. isolate JTYGF13_16/55 genomic sequence blastn 465 431 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Patatavirales Potyviridae Potyvirus Potyvirus sp.
27762886 27762886 PRJNA1097627_P_NODE_165764_length_247_cov_0.885057_g165471_i0 PRJNA1097627 165764 247 0.885057 2.18609079 Guiyang chuvirus 1 2905498 Viruses Viruses 46.2 0.00232   NR UHK03045.1 2905498 g165471 i0 64.7 0.412955465587045 34 12 41.3 0 3 104 177 210 UHK03045.1 MAG: hypothetical protein GuCV1_gp2 [Guiyang chuvirus 1] diamond 102 46.2 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Chuvivirus Guiyang chuvirus 1
30130486 30130486 PRJNA1097627_P_NODE_188132_length_243_cov_0.905882_g187839_i0 PRJNA1097627 188132 243 0.905882 2.20129326 Comovirinae sp. 2767531 Viruses Viruses 137 2.5799999999999996e-35   NR QNN26327.1 2767531 g187839 i0 92.5 0.987654320987654 80 6 98.8 0 242 3 23 102 QNN26327.1 polyprotein 2 [Comovirinae sp.] diamond 240 137 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae   Comovirinae sp.
30162196 30162196 PRJNA1097627_P_NODE_159632_length_248_cov_0.880000_g159339_i0 PRJNA1097627 159632 248 0.88 2.1824 Caudoviricetes sp. 2832643 Viruses Viruses 40.4 0.0464   NR DAY40205.1 2832643 g159339 i0 39.6 0.580645161290323 48 29 58.1 0 75 218 3 50 DAY40205.1 MAG TPA: hypothetical protein [Caudoviricetes sp.] diamond 144 40.4 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
32122607 32122607 PRJNA1097627_P_NODE_47598_length_320_cov_1.097166_g47306_i0 PRJNA1097627 47598 320 1.097166 3.5109312 Comovirinae sp. 2767531 Viruses Viruses 200 2.15e-57   NR QNN26327.1 2767531 g47306 i0 95.3 0.99375 106 5 99.4 0 318 1 101 206 QNN26327.1 polyprotein 2 [Comovirinae sp.] diamond 318 200 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae   Comovirinae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;