RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1097627", tax_kingdom = "Pseudomonadati" and tax_phylum = "Bdellovibrionota"

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tax_superkingdom 1

tax_phylum 1

  • Bdellovibrionota · 2 ✖

tax_kingdom 1

  • Pseudomonadati · 2 ✖

bioproject 1

  • PRJNA1097627 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30699444 30699444 PRJNA1097627_P_NODE_42014_length_327_cov_2.114173_g41722_i0 PRJNA1097627 42014 327 2.114173 6.91334571 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 80.9 3.74e-16   NR HEY8279663.1 3034175 g41722 i0 46.1 0.81651376146789 89 40 81.7 2 267 1 43 123 HEY8279663.1 hypothetical protein [Bdellovibrionota bacterium] diamond 267 80.9 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
31670784 31670784 PRJNA1097627_P_NODE_139737_length_251_cov_0.865169_g139444_i0 PRJNA1097627 139737 251 0.865169 2.17157419 Micavibrio 213485 Bacteria Bacteria 136 3.96e-38   NR PZQ49135.1 349221 g139444 i0 77.1 3.9681274900398402 83 19 99.2 0 2 250 5 87 PZQ49135.1 MAG: type IV secretion protein DotN [Micavibrio aeruginosavorus] diamond 996 136 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Micavibrio Micavibrio aeruginosavorus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;