RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1097627", tax_kingdom = "Orthornavirae" and tax_phylum = "Negarnaviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 3 ✖

tax_kingdom 1

  • Orthornavirae · 3 ✖

bioproject 1

  • PRJNA1097627 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1019666 1019666 PRJNA1097627_P_NODE_145361_length_250_cov_0.870056_g145068_i0 PRJNA1097627 145361 250 0.870056 2.17514 Orthorubulavirus 2560195 Viruses Viruses 462 8.83e-126   NTclustered gi|1378763606|gb|MF170889.1| 2560580 g145068 i0 100 68 250 0 100 0 1 250 10498 10747 Mammalian orthorubulavirus 5 strain Rigel, complete genome blastn 17000 462 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
9947917 9947917 PRJNA1097627_P_NODE_156408_length_248_cov_1.320000_g156115_i0 PRJNA1097627 156408 248 1.32 3.2736 Orthorubulavirus 2560195 Viruses Viruses 459 1.13e-124   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g156115 i0 100 82.4596774193548 248 0 100 0 1 248 2293 2046 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 20450 459 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
27762886 27762886 PRJNA1097627_P_NODE_165764_length_247_cov_0.885057_g165471_i0 PRJNA1097627 165764 247 0.885057 2.18609079 Guiyang chuvirus 1 2905498 Viruses Viruses 46.2 0.00232   NR UHK03045.1 2905498 g165471 i0 64.7 0.412955465587045 34 12 41.3 0 3 104 177 210 UHK03045.1 MAG: hypothetical protein GuCV1_gp2 [Guiyang chuvirus 1] diamond 102 46.2 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Chuvivirus Guiyang chuvirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;