RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

9 rows where bioproject = "PRJNA1097627", tax_kingdom = "Metazoa" and tax_phylum = "Mollusca"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 9 ✖

tax_kingdom 1

  • Metazoa · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA1097627 · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
202958 202958 PRJNA1097627_P_NODE_119661_length_262_cov_0.835979_g119368_i0 PRJNA1097627 119661 262 0.835979 2.19026498 Bradybaena similaris 145626 Mollusca Mollusca 52.8 0.024   NTclustered gi|2912987826|dbj|AP039592.1| 145626 g119368 i0 100 0.106870229007634 28 0 11 0 202 229 65001139 65001166 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 11, sequence blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
11683926 11683926 PRJNA1097627_P_NODE_164690_length_247_cov_0.885057_g164397_i0 PRJNA1097627 164690 247 0.885057 2.18609079 Mizuhopecten yessoensis 6573 Mollusca Mollusca 52.8 0.022   NTclustered gi|1207981855|ref|XR_002461893.1| 6573 g164397 i0 94.286 0.1417004048583 35 0 13 2 147 179 2964 2998 PREDICTED: Mizuhopecten yessoensis uncharacterized LOC110441628 (LOC110441628), ncRNA blastn 35 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Mizuhopecten Mizuhopecten yessoensis
20607964 20607964 PRJNA1097627_P_NODE_197937_length_242_cov_0.911243_g197644_i0 PRJNA1097627 197937 242 0.911243 2.20520806 Bradybaena similaris 145626 Mollusca Mollusca 65.8 2.8e-6   NTclustered gi|2912996298|dbj|AP039601.1| 145626 g197644 i0 88.889 0.223140495867769 54 4 22 2 103 156 52027274 52027223 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 20, sequence blastn 54 65.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
26972651 26972651 PRJNA1097627_P_NODE_195842_length_242_cov_0.911243_g195549_i0 PRJNA1097627 195842 242 0.911243 2.20520806 Plakobranchus ocellatus 259542 Mollusca Mollusca 43.1 0.0245   NR GFN92605.1 259542 g195549 i0 45.3 0.65702479338843 53 29 65.7 0 230 72 121 173 GFN92605.1 hypothetical protein PoB_001911100 [Plakobranchus ocellatus] diamond 159 43.1 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Plakobranchidae Plakobranchus Plakobranchus ocellatus
28922022 28922022 PRJNA1097627_P_NODE_159688_length_248_cov_0.880000_g159395_i0 PRJNA1097627 159688 248 0.88 2.1824 Bivalvia 6544 Mollusca Mollusca 56.2 4.93e-7   NR XP_062616134.1 36930 g159395 i0 38.6 1.97177419354839 83 50 99.2 1 247 2 24 106 XP_062616134.1 uncharacterized protein LOC134277851 [Saccostrea cuccullata] diamond 489 56.2 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Saccostrea Saccostrea cuccullata
29467276 29467276 PRJNA1097627_P_NODE_203470_length_241_cov_0.916667_g203177_i0 PRJNA1097627 203470 241 0.916667 2.20916747 Bradybaena similaris 145626 Mollusca Mollusca 72 1.64e-13   NR BFZ00183.1 145626 g203177 i0 50 2.14107883817427 64 32 79.7 0 196 5 88 151 BFZ00183.1 hypothetical protein BsWGS_03222 [Bradybaena similaris] diamond 516 72 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
31426451 31426451 PRJNA1097627_P_NODE_177316_length_245_cov_0.895349_g177023_i0 PRJNA1097627 177316 245 0.895349 2.19360505 Pomacea canaliculata 400727 Mollusca Mollusca 45.8 6.79e-4   NR PVD24866.1 400727 g177023 i0 46.5 0.52653061224489806 43 23 52.7 0 1 129 49 91 PVD24866.1 hypothetical protein C0Q70_15355 [Pomacea canaliculata] diamond 129 45.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Architaenioglossa Ampullariidae Pomacea Pomacea canaliculata
32557011 32557011 PRJNA1097627_P_NODE_200959_length_241_cov_0.916667_g200666_i0 PRJNA1097627 200959 241 0.916667 2.20916747 Metazoa 33208 Mollusca Mollusca 43.1 0.0221   NR XP_071137227.1 6550 g200666 i0 51.3 1.45643153526971 39 19 48.5 0 1 117 179 217 XP_071137227.1 uncharacterized protein [Mytilus edulis] diamond 351 43.5 0.990804597701149 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
32880233 32880233 PRJNA1097627_P_NODE_209360_length_217_cov_4.125000_g209067_i0 PRJNA1097627 209360 217 4.125 8.95125 Biomphalaria glabrata 6526 Mollusca Mollusca 42.4 0.00504   NR KAI8727607.1 6526 g209067 i0 51.7 0.400921658986175 29 14 40.1 0 214 128 41 69 KAI8727607.1 hypothetical protein BgiBS90_038149 [Biomphalaria glabrata] diamond 87 42.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Planorbidae Biomphalaria Biomphalaria glabrata

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;