RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1097627", tax_kingdom = "Fungi" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1097627 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31164515 31164515 PRJNA1097627_P_NODE_186655_length_243_cov_1.594118_g186362_i0 PRJNA1097627 186655 243 1.594118 3.87370674 root 1 Root_unresolved Root_unresolved 80.9 5.46e-16   NR CAB4419721.1 588596 g186362 i0 55.7 12.1111111111111 70 31 86.4 0 32 241 161 230 CAB4419721.1 unnamed protein product [Rhizophagus irregularis] diamond 2943 81.3 0.995079950799508 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Rhizophagus Rhizophagus irregularis
31711174 31711174 PRJNA1097627_P_NODE_127237_length_257_cov_1.630435_g126944_i0 PRJNA1097627 127237 257 1.630435 4.19021795 Absidia glauca 4829 Fungi Fungi 42.7 0.0451   NR SAL99849.1 4829 g126944 i0 37.5 0.653696498054475 56 35 65.4 0 188 21 520 575 SAL99849.1 hypothetical protein [Absidia glauca] diamond 168 42.7 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Absidia Absidia glauca
32312578 32312578 PRJNA1097627_P_NODE_207819_length_230_cov_2.484076_g207526_i0 PRJNA1097627 207819 230 2.484076 5.7133748 Mortierella sp. AM989 1896186 Fungi Fungi 43.1 0.0228   NR KAF9110460.1 1896186 g207526 i0 47.8 0.6 46 24 60 0 149 12 63 108 KAF9110460.1 hypothetical protein BGX27_006307 [Mortierella sp. AM989] diamond 138 43.1 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Mortierella Mortierella sp. AM989

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;