RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1097627", tax_clade = "Opisthokonta" and tax_phylum = "Cnidaria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA1097627 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9132593 9132593 PRJNA1097627_P_NODE_159368_length_248_cov_0.880000_g159075_i0 PRJNA1097627 159368 248 0.88 2.1824 Anemonia sulcata 6108 Cnidaria other_Eukaryota 52.8 0.022   NTclustered gi|2917940752|emb|OZ237570.1| 6108 g159075 i0 90.244 0.165322580645161 41 2 16 2 31 70 9013359 9013320 Anemonia sulcata genome assembly, chromosome: 16 blastn 41 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
29183628 29183628 PRJNA1097627_P_NODE_97689_length_275_cov_1.371287_g97396_i0 PRJNA1097627 97689 275 1.371287 3.77103925 Paramuricea clavata 317549 Cnidaria other_Eukaryota 54.7 6.35e-7   NR CAB4026058.1 317549 g97396 i0 42 0.883636363636364 81 46 88.4 1 268 26 33 112 CAB4026058.1 Hypothetical predicted protein, partial [Paramuricea clavata] diamond 243 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Plexauridae Paramuricea Paramuricea clavata
32871628 32871628 PRJNA1097627_P_NODE_160000_length_248_cov_0.880000_g159707_i0 PRJNA1097627 160000 248 0.88 2.1824 Metazoa 33208 Cnidaria other_Eukaryota 42.7 0.0401   NR KAK2561200.1 6130 g159707 i0 58.1 3.60483870967742 31 13 37.5 0 107 199 18 48 KAK2561200.1 U-box domain-containing protein 34 [Acropora cervicornis] diamond 894 43.1 0.990719257540603 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora cervicornis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;