RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1097627" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA1097627 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30415530 30415530 PRJNA1097627_P_NODE_143833_length_250_cov_1.706215_g143540_i0 PRJNA1097627 143833 250 1.706215 4.2655375 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 43.1 0.0296   NR TMQ23285.1 2053607 g143540 i0 41.1 0.672 56 28 62.4 2 199 44 449 503 TMQ23285.1 MAG: M23 family metallopeptidase [Candidatus Rokuibacteriota bacterium] diamond 168 43.1 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
31458268 31458268 PRJNA1097627_P_NODE_196856_length_242_cov_0.911243_g196563_i0 PRJNA1097627 196856 242 0.911243 2.20520806 Candidatus Eiseniibacteriota bacterium 2212470 Bacteria Bacteria 45.4 0.00418   NR MCX5801082.1 2212470 g196563 i0 40.9 0.545454545454545 44 23 54.5 1 215 84 1007 1047 MCX5801082.1 immune inhibitor A [Candidatus Eiseniibacteriota bacterium] diamond 132 45.4 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium
31806037 31806037 PRJNA1097627_P_NODE_203377_length_241_cov_0.916667_g203084_i0 PRJNA1097627 203377 241 0.916667 2.20916747 Patescibacteria group bacterium 2052139 Bacteria Bacteria 135 3.49e-36   NR MCK9361168.1 2052139 g203084 i0 86.3 0.995850622406639 80 11 99.6 0 241 2 316 395 MCK9361168.1 ABC transporter permease [Patescibacteria group bacterium] diamond 240 135 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;