RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1095825" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1095825 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28195820 28195820 PRJNA1095825_P_NODE_161606_length_307_cov_1.273504_g158543_i0 PRJNA1095825 161606 307 1.273504 3.90965728 root 1 Root_unresolved Root_unresolved 111 7.150000000000001e-27   NR KAF4680607.1 32597 g158543 i0 60.2 10.6905537459283 98 30 95.8 1 296 3 66 154 KAF4680607.1 hypothetical protein FOZ60_013227, partial [Perkinsus olseni] diamond 3282 111 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
28488865 28488865 PRJNA1095825_P_NODE_276367_length_244_cov_0.900585_g273304_i0 PRJNA1095825 276367 244 0.900585 2.1974274 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 49.3 1.71e-4   NR KAF4685574.1 32597 g273304 i0 53.8 0.959016393442623 39 17 48 1 118 2 101 138 KAF4685574.1 hypothetical protein FOZ62_006760, partial [Perkinsus olseni] diamond 234 49.3 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;