RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1095825", tax_phylum = "Kitrinoviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 4 ✖

tax_phylum 1

  • Kitrinoviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1095825 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7853854 7853854 PRJNA1095825_P_NODE_291907_length_242_cov_0.905325_g288844_i0 PRJNA1095825 291907 242 0.905325 2.1908865 Pestivirus bovis 3052619 Viruses Viruses 54.7 0.006   NTclustered gi|1169640532|emb|LT837585.1| 11099 g288844 i0 100 0.119834710743802 29 0 12 0 1 29 12189 12161 Bovine viral diarrhea virus 1 genome assembly, complete genome: monopartite blastn 29 54.7 1 Viruses   Orthornavirae Kitrinoviricota Flasuviricetes Amarillovirales Flaviviridae Pestivirus Pestivirus bovis
30564178 30564178 PRJNA1095825_P_NODE_139713_length_328_cov_1.145098_g136650_i0 PRJNA1095825 139713 328 1.145098 3.75592144 Viruses 10239 Viruses Viruses 53.5 1.73e-5   NR UQB76018.1 2941073 g136650 i0 40.3 1.97560975609756 67 39 61.3 1 128 328 1006 1071 UQB76018.1 non-structural polyprotein [Flumine hepe-like virus 2] diamond 648 53.9 0.992578849721707 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Hepelivirales Hepeviridae   Flumine hepe-like virus 2
31363351 31363351 PRJNA1095825_P_NODE_124436_length_345_cov_1.113971_g121373_i0 PRJNA1095825 124436 345 1.113971 3.84319995 Hepelivirales sp. 2809460 Viruses Viruses 72.4 4.99e-12   NR WAY16437.1 2809460 g121373 i0 38.5 0.947826086956522 109 66 93.9 1 344 21 1840 1948 WAY16437.1 nonstructural polyprotein [Hepelivirales sp.] diamond 327 72.4 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Hepelivirales     Hepelivirales sp.
32122599 32122599 PRJNA1095825_P_NODE_88718_length_403_cov_0.930303_g85655_i0 PRJNA1095825 88718 403 0.930303 3.74912109 Krauss' spikemoss associated endorna-like virus 2933173 Viruses Viruses 170 4.419999999999999e-46   NR CAI5383962.1 2933173 g85655 i0 62.4 0.990074441687345 133 49 99 1 401 3 3590 3721 CAI5383962.1 polyprotein [Krauss' spikemoss associated endorna-like virus] diamond 399 170 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Endornaviridae   Krauss' spikemoss associated endorna-like virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;