RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1095825" and tax_phylum = "Candidatus Latescibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Latescibacterota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1095825 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26592557 26592557 PRJNA1095825_P_NODE_196461_length_279_cov_1.398058_g193398_i0 PRJNA1095825 196461 279 1.398058 3.90058182 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 59.7 6.64e-8   NR MFC1551920.1 2053570 g193398 i0 37.4 0.978494623655914 91 55 95.7 1 7 273 1627 1717 MFC1551920.1 SUMF1/EgtB/PvdO family nonheme iron enzyme [Candidatus Latescibacterota bacterium] diamond 273 59.7 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
29467249 29467249 PRJNA1095825_P_NODE_252490_length_248_cov_1.422857_g249427_i0 PRJNA1095825 252490 248 1.422857 3.52868536 Latescibacteria bacterium DG_63 1703781 Bacteria Bacteria 43.5 0.0173   NR KPJ59100.1 1703781 g249427 i0 44 0.604838709677419 50 26 60.5 1 160 11 1 48 KPJ59100.1 MAG: hypothetical protein AMJ46_12605 [Latescibacteria bacterium DG_63] diamond 150 43.5 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Latescibacteria bacterium DG_63
30604678 30604678 PRJNA1095825_P_NODE_280113_length_244_cov_0.900585_g277050_i0 PRJNA1095825 280113 244 0.900585 2.1974274 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 93.6 4.96e-20   NR MEW6752452.1 2053570 g277050 i0 64.2 0.995901639344262 81 29 99.6 0 244 2 770 850 MEW6752452.1 adenylate/guanylate cyclase domain-containing protein [Candidatus Latescibacterota bacterium] diamond 243 93.6 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
31299916 31299916 PRJNA1095825_P_NODE_223995_length_259_cov_1.655914_g220932_i0 PRJNA1095825 223995 259 1.655914 4.28881726 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 131 1.28e-33   NR MEW6750824.1 2053570 g220932 i0 78.2 0.903474903474903 78 17 90.3 0 257 24 468 545 MEW6750824.1 single-stranded-DNA-specific exonuclease RecJ [Candidatus Latescibacterota bacterium] diamond 234 131 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;