RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA1095825" and tax_phylum = "Armatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 8 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1095825 · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11678982 11678982 PRJNA1095825_P_NODE_204970_length_273_cov_1.230000_g201907_i0 PRJNA1095825 204970 273 1.23 3.3579 Capsulimonas corticalis 2219043 Bacteria Bacteria 176 1.43e-39   NTclustered gi|2240447379|dbj|AP025739.1| 2219043 g201907 i0 80.081 35.9084249084249 246 41 89 7 32 273 7428316 7428557 Capsulimonas corticalis AX-7 DNA, complete genome blastn 9803 176 1 Bacteria   Bacillati Armatimonadota Armatimonadia Capsulimonadales Capsulimonadaceae Capsulimonas Capsulimonas corticalis
18870946 18870946 PRJNA1095825_P_NODE_163295_length_305_cov_1.797414_g160232_i0 PRJNA1095825 163295 305 1.797414 5.4821127 Fimbriimonas 1005038 Bacteria Bacteria 431 3.13e-116   NTclustered gi|663071213|gb|CP007139.1| 661478 g160232 i0 93.793 136.524590163934 290 13 95 2 1 290 28430 28714 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 41640 431 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
26940950 26940950 PRJNA1095825_P_NODE_230062_length_255_cov_1.313187_g226999_i0 PRJNA1095825 230062 255 1.313187 3.34862685 Armatimonadota bacterium 2033014 Bacteria Bacteria 85.9 2.87e-17   NR MDQ2730737.1 2033014 g226999 i0 57.3 3.94117647058824 82 34 95.3 1 243 1 418 499 MDQ2730737.1 aminodeoxychorismate synthase component I [Armatimonadota bacterium] diamond 1005 85.9 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
27415539 27415539 PRJNA1095825_P_NODE_243643_length_250_cov_0.870056_g240580_i0 PRJNA1095825 243643 250 0.870056 2.17514 Capsulimonadaceae bacterium 2953755 Bacteria Bacteria 55.5 5.65e-7   NR MDR3709674.1 2953755 g240580 i0 62.2 0.54 45 17 54 0 3 137 138 182 MDR3709674.1 recombinase family protein [Capsulimonadaceae bacterium] diamond 135 55.5 1 Bacteria   Bacillati Armatimonadota Armatimonadia Capsulimonadales Capsulimonadaceae   Capsulimonadaceae bacterium
28299298 28299298 PRJNA1095825_P_NODE_294646_length_241_cov_0.916667_g291583_i0 PRJNA1095825 294646 241 0.916667 2.20916747 Armatimonadota bacterium 2033014 Bacteria Bacteria 74.7 1.77e-13   NR MES1227692.1 2033014 g291583 i0 50.7 0.908713692946058 73 34 90.9 1 7 225 53 123 MES1227692.1 hypothetical protein [Armatimonadota bacterium] diamond 219 74.7 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
29246516 29246516 PRJNA1095825_P_NODE_284529_length_243_cov_0.905882_g281466_i0 PRJNA1095825 284529 243 0.905882 2.20129326 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 60.1 1.04e-8   NR MBL8066011.1 2739509 g281466 i0 38.4 0.901234567901235 73 45 90.1 0 15 233 130 202 MBL8066011.1 hypothetical protein [Chthonomonadaceae bacterium] diamond 219 60.1 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
30889151 30889151 PRJNA1095825_P_NODE_265194_length_246_cov_0.890173_g262131_i0 PRJNA1095825 265194 246 0.890173 2.18982558 Armatimonadia bacterium 2663015 Bacteria Bacteria 76.3 6.47e-14   NR MEN6302245.1 2663015 g262131 i0 47.4 0.951219512195122 78 41 95.1 0 234 1 3400 3477 MEN6302245.1 LPD38 domain-containing protein [Armatimonadia bacterium] diamond 234 76.3 1 Bacteria   Bacillati Armatimonadota Armatimonadia       Armatimonadia bacterium
32785655 32785655 PRJNA1095825_P_NODE_262100_length_247_cov_0.885057_g259037_i0 PRJNA1095825 262100 247 0.885057 2.18609079 Fimbriimonas sp. 1936159 Bacteria Bacteria 139 3.789999999999999e-37   NR HEY0866423.1 1936159 g259037 i0 81.7 0.995951417004049 82 15 99.6 0 246 1 278 359 HEY0866423.1 adenylosuccinate synthase [Fimbriimonas sp.] diamond 246 139 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;