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contig_metadata

24 rows where bioproject = "PRJNA1095825", tax_kingdom = "Pseudomonadati" and tax_phylum = "Bdellovibrionota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Bdellovibrionota · 24 ✖

tax_kingdom 1

  • Pseudomonadati · 24 ✖

bioproject 1

  • PRJNA1095825 · 24 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5302388 5302388 PRJNA1095825_P_NODE_103645_length_374_cov_1.534884_g100582_i0 PRJNA1095825 103645 374 1.534884 5.74046616 Bdellovibrio sp. qaytius 1916293 Bacteria Bacteria 353 8.71e-93   NTclustered gi|1552089877|gb|CP025734.1| 1916293 g100582 i0 86.728 170.743315508021 324 35 87 5 51 374 666873 666558 Bdellovibrio sp. qaytius chromosome, complete genome blastn 63858 353 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp. qaytius
7853791 7853791 PRJNA1095825_P_NODE_285287_length_243_cov_0.905882_g282224_i0 PRJNA1095825 285287 243 0.905882 2.20129326 Pseudobdellovibrionaceae bacterium 2026715 Bacteria Bacteria 124 2.6499999999999996e-31   NR MCM2282157.1 2026715 g282224 i0 77.8 1 81 17 98.8 1 3 242 136 216 MCM2282157.1 replicative DNA helicase [Pseudobdellovibrionaceae bacterium] diamond 243 124 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae   Pseudobdellovibrionaceae bacterium
26814568 26814568 PRJNA1095825_P_NODE_240921_length_250_cov_1.700565_g237858_i0 PRJNA1095825 240921 250 1.700565 4.2514125 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 44.3 0.00969   NR HEY8278321.1 3034175 g237858 i0 52.1 0.576 48 23 57.6 0 7 150 172 219 HEY8278321.1 hypothetical protein [Bdellovibrionota bacterium] diamond 144 44.3 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
27067527 27067527 PRJNA1095825_P_NODE_238182_length_251_cov_0.865169_g235119_i0 PRJNA1095825 238182 251 0.865169 2.17157419 Oligoflexus sp. 1971216 Bacteria Bacteria 100 1.1499999999999999e-23   NR WP_324955171.1 1971216 g235119 i0 57.3 1.94820717131474 82 35 98 0 1 246 75 156 WP_324955171.1 serine aminopeptidase domain-containing protein [Oligoflexus sp.] diamond 489 100 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia Oligoflexales Oligoflexaceae Oligoflexus Oligoflexus sp.
27532906 27532906 PRJNA1095825_P_NODE_246283_length_249_cov_1.750000_g243220_i0 PRJNA1095825 246283 249 1.75 4.3575 Bacteria 2 Bacteria Bacteria 133 9.84e-36   NR OFZ52870.1 1797397 g243220 i0 72.3 6 83 23 100 0 249 1 227 309 OFZ52870.1 MAG: 8-amino-7-oxononanoate synthase, partial [Bdellovibrionales bacterium RIFOXYC1_FULL_54_43] diamond 1494 134 0.992537313432836 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium RIFOXYC1_FULL_54_43
27564255 27564255 PRJNA1095825_P_NODE_292024_length_242_cov_0.863905_g288961_i0 PRJNA1095825 292024 242 0.863905 2.0906501 Pseudomonadati 3379134 Bacteria Bacteria 104 8.999999999999998e-25   NR OFZ55096.1 1797397 g288961 i0 76.6 12.7685950413223 64 15 79.3 0 241 50 57 120 OFZ55096.1 MAG: ornithine carbamoyltransferase [Bdellovibrionales bacterium RIFOXYC1_FULL_54_43] diamond 3090 105 0.990476190476191 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium RIFOXYC1_FULL_54_43
27604896 27604896 PRJNA1095825_P_NODE_273744_length_245_cov_0.895349_g270681_i0 PRJNA1095825 273744 245 0.895349 2.19360505 Oligoflexus sp. 1971216 Bacteria Bacteria 143 2.55e-39   NR WP_324958268.1 1971216 g270681 i0 78.8 1.95918367346939 80 17 98 0 2 241 243 322 WP_324958268.1 A/G-specific adenine glycosylase [Oligoflexus sp.] diamond 480 143 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia Oligoflexales Oligoflexaceae Oligoflexus Oligoflexus sp.
28772856 28772856 PRJNA1095825_P_NODE_185507_length_287_cov_1.327103_g182444_i0 PRJNA1095825 185507 287 1.327103 3.80878561 Bacteriovoracaceae bacterium 2081706 Bacteria Bacteria 62.8 3.48e-9   NR MCK5072915.1 2081706 g182444 i0 45.2 1.90243902439024 62 34 64.8 0 188 3 4 65 MCK5072915.1 TIGR02147 family protein [Bacteriovoracaceae bacterium] diamond 546 62.8 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae   Bacteriovoracaceae bacterium
28962659 28962659 PRJNA1095825_P_NODE_280768_length_243_cov_1.811765_g277705_i0 PRJNA1095825 280768 243 1.811765 4.40258895 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 148 1.47e-40   NR HEY8278342.1 3034175 g277705 i0 88.9 1 81 9 100 0 243 1 61 141 HEY8278342.1 aspartate aminotransferase family protein [Bdellovibrionota bacterium] diamond 243 148 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
28962660 28962660 PRJNA1095825_P_NODE_284368_length_243_cov_0.905882_g281305_i0 PRJNA1095825 284368 243 0.905882 2.20129326 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 50.8 3.94e-5   NR HEY8279457.1 3034175 g281305 i0 56.4 0.481481481481481 39 16 46.9 1 2 115 205 243 HEY8279457.1 hypothetical protein [Bdellovibrionota bacterium] diamond 117 50.8 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
29088798 29088798 PRJNA1095825_P_NODE_299808_length_228_cov_2.503226_g296745_i0 PRJNA1095825 299808 228 2.503226 5.70735528 Bdellovibrio sp. BCCA 3136281 Bacteria Bacteria 90.1 5.11e-20   NR WP_340591446.1 3136281 g296745 i0 54.5 0.868421052631579 66 30 86.8 0 226 29 173 238 WP_340591446.1 creatininase family protein [Bdellovibrio sp. BCCA] diamond 198 90.1 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp. BCCA
29120517 29120517 PRJNA1095825_P_NODE_271829_length_245_cov_0.895349_g268766_i0 PRJNA1095825 271829 245 0.895349 2.19360505 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 77.8 2.17e-15   NR HEY8278976.1 3034175 g268766 i0 64.9 1.39591836734694 57 19 68.6 1 168 1 1 57 HEY8278976.1 cyclase family protein [Bdellovibrionota bacterium] diamond 342 77.8 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
29277987 29277987 PRJNA1095825_P_NODE_254009_length_248_cov_0.880000_g250946_i0 PRJNA1095825 254009 248 0.88 2.1824 Pseudobdellovibrionaceae bacterium 2026715 Bacteria Bacteria 77.8 1.79e-14   NR MBX3041499.1 2026715 g250946 i0 48.8 6.32661290322581 80 41 96.8 0 246 7 334 413 MBX3041499.1 cytochrome P450 [Pseudobdellovibrionaceae bacterium] diamond 1569 77.8 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae   Pseudobdellovibrionaceae bacterium
30099057 30099057 PRJNA1095825_P_NODE_236712_length_251_cov_0.865169_g233649_i0 PRJNA1095825 236712 251 0.865169 2.17157419 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 63.5 1.84e-9   NR HEY8279698.1 3034175 g233649 i0 41.4 1.0398406374502 87 45 98 3 248 3 60 145 HEY8279698.1 hypothetical protein [Bdellovibrionota bacterium] diamond 261 63.5 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
30825872 30825872 PRJNA1095825_P_NODE_288354_length_242_cov_0.911243_g285291_i0 PRJNA1095825 288354 242 0.911243 2.20520806 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 99.8 4.78e-24   NR MCB0366077.1 2053517 g285291 i0 48.8 0.991735537190083 80 41 99.2 0 240 1 94 173 MCB0366077.1 hypothetical protein [Bdellovibrionales bacterium] diamond 240 99.8 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
31141496 31141496 PRJNA1095825_P_NODE_234795_length_251_cov_2.230337_g231732_i0 PRJNA1095825 234795 251 2.230337 5.59814587 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 130 7.67e-33   NR MEK6774059.1 3034175 g231732 i0 73.8 0.956175298804781 80 21 95.6 0 11 250 695 774 MEK6774059.1 outer membrane protein assembly factor BamA [Bdellovibrionota bacterium] diamond 240 130 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
31204622 31204622 PRJNA1095825_P_NODE_237055_length_251_cov_0.865169_g233992_i0 PRJNA1095825 237055 251 0.865169 2.17157419 Bdellovibrionales bacterium RIFOXYB1_FULL_39_21 1797406 Bacteria Bacteria 99.4 4.6e-23   NR OFZ39096.1 1797406 g233992 i0 56.6 0.99203187250996006 83 35 98 1 251 6 203 285 OFZ39096.1 MAG: hypothetical protein A2385_07950 [Bdellovibrionales bacterium RIFOXYB1_FULL_39_21] diamond 249 99.4 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium RIFOXYB1_FULL_39_21
31322839 31322839 PRJNA1095825_P_NODE_258055_length_247_cov_1.534483_g254992_i0 PRJNA1095825 258055 247 1.534483 3.79017301 Pseudomonadati 3379134 Bacteria Bacteria 74.3 2.69e-13   NR MBL7556514.1 2026715 g254992 i0 47.9 1.79757085020243 73 35 85 1 245 36 376 448 MBL7556514.1 IS5 family transposase [Pseudobdellovibrionaceae bacterium] diamond 444 74.7 0.994645247657296 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae   Pseudobdellovibrionaceae bacterium
31394971 31394971 PRJNA1095825_P_NODE_211856_length_268_cov_1.405128_g208793_i0 PRJNA1095825 211856 268 1.405128 3.76574304 Bdellovibrio sp. 28201 Bacteria Bacteria 113 2.4799999999999998e-28   NR MBI2712231.1 28201 g208793 i0 62.8 1.69029850746269 78 29 87.3 0 33 266 143 220 MBI2712231.1 hypothetical protein [Bdellovibrio sp.] diamond 453 113 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp.
31417785 31417785 PRJNA1095825_P_NODE_247796_length_249_cov_0.875000_g244733_i0 PRJNA1095825 247796 249 0.875 2.17875 Peredibacter 263370 Bacteria Bacteria 149 8.939999999999999e-40   NR WP_321390425.1 28202 g244733 i0 92.7 2.96385542168675 82 6 98.8 0 3 248 335 416 WP_321390425.1 OPT family oligopeptide transporter [Peredibacter starrii] diamond 738 149 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Peredibacter Peredibacter starrii
32027547 32027547 PRJNA1095825_P_NODE_292518_length_241_cov_1.797619_g289455_i0 PRJNA1095825 292518 241 1.797619 4.33226179 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 150 4.1e-40   NR MCC7403152.1 2053517 g289455 i0 98.8 0.995850622406639 80 1 99.6 0 2 241 21 100 MCC7403152.1 acyltransferase [Bdellovibrionales bacterium] diamond 240 150 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
32185785 32185785 PRJNA1095825_P_NODE_256758_length_248_cov_0.880000_g253695_i0 PRJNA1095825 256758 248 0.88 2.1824 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 115 1.34e-29   NR MEQ1665765.1 2053517 g253695 i0 67.1 0.991935483870968 82 27 99.2 0 248 3 104 185 MEQ1665765.1 lysophospholipase [Bdellovibrionales bacterium] diamond 246 115 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
32407244 32407244 PRJNA1095825_P_NODE_219939_length_262_cov_1.629630_g216876_i0 PRJNA1095825 219939 262 1.62963 4.2696306 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 156 5.3499999999999997e-42   NR MBY0314560.1 2053517 g216876 i0 87.4 3.98473282442748 87 11 99.6 0 262 2 702 788 MBY0314560.1 TraC family protein [Bdellovibrionales bacterium] diamond 1044 156 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
32722866 32722866 PRJNA1095825_P_NODE_208700_length_270_cov_1.563452_g205637_i0 PRJNA1095825 208700 270 1.563452 4.2213204 Oligoflexales bacterium 2687297 Bacteria Bacteria 42.7 0.0485   NR MFK7823623.1 2687297 g205637 i0 41.9 0.344444444444444 31 18 34.4 0 111 203 222 252 MFK7823623.1 ABC transporter substrate-binding protein [Oligoflexales bacterium] diamond 93 42.7 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia Oligoflexales     Oligoflexales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;