RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1095825", tax_kingdom = "Metazoa" and tax_phylum = "Rotifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Rotifera · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1095825 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18052420 18052420 PRJNA1095825_P_NODE_248895_length_249_cov_0.875000_g245832_i0 PRJNA1095825 248895 249 0.875 2.17875 Brachionus rubens 392764 Rotifera other_Eukaryota 54.7 0.006   NTclustered gi|1802791198|gb|MN256531.1| 392764 g245832 i0 94.286 0.140562248995984 35 2 14 0 202 236 11808 11774 Brachionus rubens chromosome I mitochondrion, complete sequence blastn 35 54.7 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens
26719081 26719081 PRJNA1095825_P_NODE_50461_length_538_cov_1.369892_g47404_i0 PRJNA1095825 50461 538 1.369892 7.37001896 Adineta ricciae 249248 Rotifera other_Eukaryota 176 8.72e-51   NR CAF1646217.1 249248 g47404 i0 62.1 3.68029739776952 132 49 73.6 1 456 61 24 154 CAF1646217.1 unnamed protein product, partial [Adineta ricciae] diamond 1980 176 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
29751494 29751494 PRJNA1095825_P_NODE_265011_length_246_cov_0.890173_g261948_i0 PRJNA1095825 265011 246 0.890173 2.18982558 Rotaria magnacalcarata 392030 Rotifera other_Eukaryota 63.2 2.45e-9   NR CAF4157773.1 392030 g261948 i0 54.5 4.02439024390244 55 23 67.1 1 227 63 320 372 CAF4157773.1 unnamed protein product [Rotaria magnacalcarata] diamond 990 63.2 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria magnacalcarata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;