RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA1095825", tax_kingdom = "Metazoa" and tax_phylum = "Echinodermata"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 7 ✖

tax_kingdom 1

  • Metazoa · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA1095825 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2751512 2751512 PRJNA1095825_P_NODE_254923_length_248_cov_0.880000_g251860_i0 PRJNA1095825 254923 248 0.88 2.1824 Calyptraster sp. 3240086 Echinodermata other_Eukaryota 52.8 0.022   NTclustered gi|2843360714|gb|PQ424520.1| 3240086 g251860 i0 100 0.112903225806452 28 0 11 0 218 245 15600 15627 Calyptraster sp. mitochondrion, partial genome blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Velatida Pterasteridae Calyptraster Calyptraster sp.
10404544 10404544 PRJNA1095825_P_NODE_297129_length_241_cov_0.916667_g294066_i0 PRJNA1095825 297129 241 0.916667 2.20916747 Acanthaster planci 133434 Echinodermata other_Eukaryota 58.4 4.66e-4   NTclustered gi|1229162798|ref|XM_022238692.1| 133434 g294066 i0 92.5 0.663900414937759 40 3 17 0 162 201 3018 3057 PREDICTED: Acanthaster planci uncharacterized LOC110981270 (LOC110981270), transcript variant X1, mRNA blastn 160 58.4 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci
27058975 27058975 PRJNA1095825_P_NODE_297702_length_241_cov_0.916667_g294639_i0 PRJNA1095825 297702 241 0.916667 2.20916747 Echinodermata 7586 Echinodermata other_Eukaryota 52.4 1.28e-5   NR XP_038052371.1 46514 g294639 i0 53.7 3.08713692946058 67 27 82.2 3 204 7 16 79 XP_038052371.1 ficolin-1-like [Patiria miniata] diamond 744 52.4 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
30478492 30478492 PRJNA1095825_P_NODE_76733_length_432_cov_1.596100_g73670_i0 PRJNA1095825 76733 432 1.5961 6.895152 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 78.6 2.16e-14   NR XP_030850438.1 7668 g73670 i0 42.4 2.01388888888889 92 52 63.2 1 19 291 167 258 XP_030850438.1 40S ribosomal protein S4 [Strongylocentrotus purpuratus] diamond 870 78.6 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
30532854 30532854 PRJNA1095825_P_NODE_295453_length_241_cov_0.916667_g292390_i0 PRJNA1095825 295453 241 0.916667 2.20916747 Metazoa 33208 Echinodermata other_Eukaryota 49.7 1.14e-4   NR KAJ8025248.1 206669 g292390 i0 56.8 0.908713692946058 37 16 46.1 0 227 117 249 285 KAJ8025248.1 hypothetical protein HOLleu_35403 [Holothuria leucospilota] diamond 219 49.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota
30541534 30541534 PRJNA1095825_P_NODE_271953_length_245_cov_0.895349_g268890_i0 PRJNA1095825 271953 245 0.895349 2.19360505 Anneissia japonica 1529436 Echinodermata other_Eukaryota 69.3 1.43e-11   NR XP_033121476.1 1529436 g268890 i0 48.3 0.73469387755102 60 27 73.5 1 202 23 300 355 XP_033121476.1 uncharacterized protein LOC117120560, partial [Anneissia japonica] diamond 180 69.3 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
32303899 32303899 PRJNA1095825_P_NODE_252379_length_248_cov_1.554286_g249316_i0 PRJNA1095825 252379 248 1.554286 3.85462928 root 1 Root_unresolved Root_unresolved 44.3 0.0092   NR PIK48495.1 307972 g249316 i0 34.3 2.56451612903226 70 45 84.7 1 219 10 89 157 PIK48495.1 hypothetical protein BSL78_14644 [Apostichopus japonicus] diamond 636 44.7 0.991051454138702 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Stichopodidae Apostichopus Apostichopus japonicus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;