RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1095825", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 4 ✖

tax_kingdom 1

  • Fungi · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA1095825 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26647242 26647242 PRJNA1095825_P_NODE_105961_length_370_cov_2.033670_g102898_i0 PRJNA1095825 105961 370 2.03367 7.524579 Fungi 4751 Fungi Fungi 121 7.54e-33   NR KAI9221418.1 64508 g102898 i0 59.8 4.71891891891892 97 39 78.6 0 24 314 14 110 KAI9221418.1 60S ribosomal protein L30 [Blastocladiella britannica] diamond 1746 122 0.991803278688525 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica
27888776 27888776 PRJNA1095825_P_NODE_201525_length_275_cov_1.876238_g198462_i0 PRJNA1095825 201525 275 1.876238 5.1596545 Allomyces macrogynus ATCC 38327 578462 Fungi Fungi 88.6 1.04e-18   NR KNE61836.1 578462 g198462 i0 48.2 0.927272727272727 85 42 92.7 1 255 1 204 286 KNE61836.1 hypothetical protein AMAG_07112 [Allomyces macrogynus ATCC 38327] diamond 255 88.6 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces macrogynus
28172967 28172967 PRJNA1095825_P_NODE_71166_length_449_cov_1.228723_g68103_i0 PRJNA1095825 71166 449 1.228723 5.51696627 Coelomomyces lativittatus 945690 Fungi Fungi 50.1 4.49e-4   NR KAJ1499711.1 945690 g68103 i0 75.9 0.193763919821826 29 7 19.4 0 180 266 152 180 KAJ1499711.1 hypothetical protein HMI54_011471, partial [Coelomomyces lativittatus] diamond 87 50.1 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Coelomomycetaceae Coelomomyces Coelomomyces lativittatus
30699421 30699421 PRJNA1095825_P_NODE_204414_length_273_cov_1.540000_g201351_i0 PRJNA1095825 204414 273 1.54 4.2042 Blastocladiella emersonii ATCC 22665 1313167 Fungi Fungi 138 4.55e-37   NR KAI9183257.1 1313167 g201351 i0 64.8 1 91 32 100 0 1 273 204 294 KAI9183257.1 sphingolipid delta-4 desaturase [Blastocladiella emersonii ATCC 22665] diamond 273 138 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;