RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1095825", tax_kingdom = "Bacillati" and tax_phylum = "Candidatus Dormiibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Dormiibacterota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA1095825 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28164448 28164448 PRJNA1095825_P_NODE_272125_length_245_cov_0.895349_g269062_i0 PRJNA1095825 272125 245 0.895349 2.19360505 Bacillati 1783272 Bacteria Bacteria 111 4.84e-29   NR HVA10860.1 2052315 g269062 i0 86.9 5.97551020408163 61 8 74.7 0 185 3 1 61 HVA10860.1 nucleoside-diphosphate kinase [Candidatus Dormiibacterota bacterium] diamond 1464 111 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
29837735 29837735 PRJNA1095825_P_NODE_290991_length_242_cov_0.911243_g287928_i0 PRJNA1095825 290991 242 0.911243 2.20520806 PVC group 1783257 Bacteria Bacteria 87.4 8.4e-19   NR HSU52662.1 2052315 g287928 i0 61.6 1.8099173553719 73 28 90.5 0 1 219 155 227 HSU52662.1 hypothetical protein [Candidatus Dormiibacterota bacterium] diamond 438 87.4 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;