RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1095825", tax_clade = "Metamonada" and tax_superkingdom = "Eukaryota"

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tax_phylum 3

tax_superkingdom 1

  • Eukaryota · 3 ✖

tax_clade 1

  • Metamonada · 3 ✖

bioproject 1

  • PRJNA1095825 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28772872 28772872 PRJNA1095825_P_NODE_270567_length_245_cov_0.895349_g267504_i0 PRJNA1095825 270567 245 0.895349 2.19360505 Aduncisulcus paluster 2918883 Fornicata other_Eukaryota 43.1 0.0288   NR GKT22870.1 2918883 g267504 i0 45.7 0.563265306122449 46 24 55.1 1 188 54 947 992 GKT22870.1 hypothetical protein ADUPG1_012251, partial [Aduncisulcus paluster] diamond 138 43.1 1 Eukaryota Metamonada   Fornicata       Aduncisulcus Aduncisulcus paluster
29490385 29490385 PRJNA1095825_P_NODE_140170_length_327_cov_1.744094_g137107_i0 PRJNA1095825 140170 327 1.744094 5.70318738 root 1 Root_unresolved Root_unresolved 113 2.8699999999999997e-30   NR KAA6379614.1 222440 g137107 i0 58.1 3.35779816513761 93 39 85.3 0 325 47 1 93 KAA6379614.1 MAG: hypothetical protein EZS28_024857 [Streblomastix strix] diamond 1098 113 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix
31711173 31711173 PRJNA1095825_P_NODE_61577_length_483_cov_1.707317_g58515_i0 PRJNA1095825 61577 483 1.707317 8.24634111 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 189 6.51e-58   NR XP_068360038.1 1144522 g58515 i0 60.1 2.90683229813665 153 61 95 0 460 2 5 157 XP_068360038.1 40S ribosomal protein S9-1 [Tritrichomonas foetus] diamond 1404 189 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;