RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1095825", tax_clade = "FCB group" and tax_phylum = "Rhodothermota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Rhodothermota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA1095825 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10405158 10405158 PRJNA1095825_P_NODE_90429_length_399_cov_1.383436_g87366_i0 PRJNA1095825 90429 399 1.383436 5.51990964 Rhodothermales bacterium 2306054 Bacteria Bacteria 52.8 0.038   NTclustered gi|2893358395|emb|OZ220686.1| 2306054 g87366 i0 100 0.0701754385964912 28 0 7 0 293 320 2835745 2835718 MAG: Rhodothermales bacterium isolate 312d6c01-350c-491a-87ad-f3958f88b76c genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
27004245 27004245 PRJNA1095825_P_NODE_283622_length_243_cov_0.905882_g280559_i0 PRJNA1095825 283622 243 0.905882 2.20129326 Rhodothermales bacterium 2306054 Bacteria Bacteria 73.2 5.1e-13   NR HMB94262.1 2306054 g280559 i0 69.2 0.641975308641975 52 16 64.2 0 242 87 290 341 HMB94262.1 Gfo/Idh/MocA family oxidoreductase [Rhodothermales bacterium] diamond 156 73.2 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
30636143 30636143 PRJNA1095825_P_NODE_274353_length_245_cov_0.895349_g271290_i0 PRJNA1095825 274353 245 0.895349 2.19360505 Rhodothermales bacterium 2306054 Bacteria Bacteria 101 8.179999999999999e-23   NR HUF10241.1 2306054 g271290 i0 66.7 0.991836734693878 81 27 99.2 0 1 243 91 171 HUF10241.1 MFS transporter [Rhodothermales bacterium] diamond 243 101 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;