RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1095825", tax_clade = "FCB group" and tax_phylum = "Fibrobacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fibrobacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA1095825 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26774267 26774267 PRJNA1095825_P_NODE_271321_length_245_cov_0.895349_g268258_i0 PRJNA1095825 271321 245 0.895349 2.19360505 Pseudomonadati 3379134 Bacteria Bacteria 48.1 4.43e-4   NR MBL8027824.1 2052160 g268258 i0 40.6 6.5265306122449 69 30 84.5 4 240 34 128 185 MBL8027824.1 M23 family metallopeptidase [Fibrobacterota bacterium] diamond 1599 48.1 1 Bacteria FCB group Pseudomonadati Fibrobacterota         Fibrobacterota bacterium
28741402 28741402 PRJNA1095825_P_NODE_283307_length_243_cov_0.905882_g280244_i0 PRJNA1095825 283307 243 0.905882 2.20129326 Chitinivibrionales bacterium 2663014 Bacteria Bacteria 87.4 1.45e-18   NR MBD3390881.1 2663014 g280244 i0 81.6 1.19753086419753 49 9 60.5 0 240 94 235 283 MBD3390881.1 AAA family ATPase [Chitinivibrionales bacterium] diamond 291 87.4 1 Bacteria FCB group Pseudomonadati Fibrobacterota Chitinivibrionia Chitinivibrionales     Chitinivibrionales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;