RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA1095825", tax_clade = "Discoba" and tax_phylum = "Euglenozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 6 ✖

tax_clade 1

  • Discoba · 6 ✖

bioproject 1

  • PRJNA1095825 · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5302468 5302468 PRJNA1095825_P_NODE_114845_length_357_cov_1.514085_g111782_i0 PRJNA1095825 114845 357 1.514085 5.40528345 Petalomonas acorensis 2529306 Euglenozoa other_Eukaryota 582 9.69e-162   NTclustered gi|1580982997|gb|MK564754.1| 2529306 g111782 i0 96.089 73.1708683473389 358 13 100 1 1 357 397 40 Petalomonas acorensis strain HFCC220 small subunit ribosomal RNA gene, partial sequence blastn 26122 582 1 Eukaryota Discoba   Euglenozoa Euglenida Petalomonadida Scytomonadidae Petalomonas Petalomonas acorensis
21877609 21877609 PRJNA1095825_P_NODE_254538_length_248_cov_0.880000_g251475_i0 PRJNA1095825 254538 248 0.88 2.1824 Leishmania major 5664 Euglenozoa other_Eukaryota 459 1.13e-124   NTclustered gi|157873427|ref|XM_001685173.1| 347515 g251475 i0 100 8 248 0 100 0 1 248 784 1031 Leishmania major strain Friedlin hypothetical protein partial mRNA blastn 1984 459 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania major
27604891 27604891 PRJNA1095825_P_NODE_260864_length_247_cov_0.885057_g257801_i0 PRJNA1095825 260864 247 0.885057 2.18609079 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 89.7 6.78e-19   NR KAJ9455577.1 91374 g257801 i0 46.3 0.995951417004049 82 44 99.6 0 2 247 33 114 KAJ9455577.1 Actin-related protein 2 [Diplonema papillatum] diamond 246 89.7 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
29467231 29467231 PRJNA1095825_P_NODE_131530_length_336_cov_3.513308_g128467_i0 PRJNA1095825 131530 336 3.513308 11.80471488 Perkinsela sp. CCAP 156 1935466 Euglenozoa other_Eukaryota 75.9 3.4e-14   NR KNH04974.1 1314962 g128467 i0 43 0.955357142857143 107 52 95.5 2 6 326 23 120 KNH04974.1 60S ribosomal protein L9 [Perkinsela sp. CCAP 1560/4] diamond 321 75.9 1 Eukaryota Discoba   Euglenozoa Kinetoplastea   Ichthyobodonidae Perkinsela Perkinsela sp. CCAP 1560/4
29751472 29751472 PRJNA1095825_P_NODE_121211_length_349_cov_1.090580_g118148_i0 PRJNA1095825 121211 349 1.09058 3.8061242 Bodo saltans 75058 Euglenozoa other_Eukaryota 43.9 0.0432   NR CUG93343.1 75058 g118148 i0 38.5 0.446991404011461 52 32 44.7 0 338 183 81 132 CUG93343.1 leucine-rich repeat protein, putative [Bodo saltans] diamond 156 43.9 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
30248791 30248791 PRJNA1095825_P_NODE_254352_length_248_cov_0.880000_g251289_i0 PRJNA1095825 254352 248 0.88 2.1824 Trypanosoma 5690 Euglenozoa other_Eukaryota 89.4 1.58e-18   NR XP_067081308.1 5694 g251289 i0 63.1 1.57258064516129 65 24 78.6 0 10 204 765 829 XP_067081308.1 major vault protein, putative [Trypanosoma equiperdum] diamond 390 89.4 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma equiperdum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;