RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA1095825", tax_clade = "Caldisericota/Cryosericota group" and tax_superkingdom = "Bacteria"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

  • Bacteria · 4 ✖

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Caldisericota/Cryosericota group · 4 ✖

bioproject 1

  • PRJNA1095825 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27288869 27288869 PRJNA1095825_P_NODE_290243_length_242_cov_0.911243_g287180_i0 PRJNA1095825 290243 242 0.911243 2.20520806 Caldisericales bacterium 2614251 Bacteria Bacteria 85.9 2.4e-17   NR NMD13913.1 2614251 g287180 i0 52.6 0.966942148760331 78 37 96.7 0 237 4 775 852 NMD13913.1 cation-translocating P-type ATPase [Caldisericales bacterium] diamond 234 85.9 1 Bacteria Caldisericota/Cryosericota group Pseudomonadati Caldisericota Caldisericia Caldisericales     Caldisericales bacterium
27920387 27920387 PRJNA1095825_P_NODE_268425_length_246_cov_0.890173_g265362_i0 PRJNA1095825 268425 246 0.890173 2.18982558 Caldisericia bacterium 2758719 Bacteria Bacteria 124 1.21e-33   NR MBP7732161.1 2758719 g265362 i0 93.9 0.804878048780488 66 4 80.5 0 199 2 1 66 MBP7732161.1 2-oxoacid:acceptor oxidoreductase family protein [Caldisericia bacterium] diamond 198 124 1 Bacteria Caldisericota/Cryosericota group Pseudomonadati Caldisericota Caldisericia       Caldisericia bacterium
30099071 30099071 PRJNA1095825_P_NODE_289572_length_242_cov_0.911243_g286509_i0 PRJNA1095825 289572 242 0.911243 2.20520806 Caldisericia bacterium 2758719 Bacteria Bacteria 107 7.39e-26   NR HON84100.1 2758719 g286509 i0 61.8 0.942148760330578 76 29 94.2 0 10 237 186 261 HON84100.1 nucleotidyltransferase domain-containing protein [Caldisericia bacterium] diamond 228 107 1 Bacteria Caldisericota/Cryosericota group Pseudomonadati Caldisericota Caldisericia       Caldisericia bacterium
32430229 32430229 PRJNA1095825_P_NODE_248639_length_249_cov_0.875000_g245576_i0 PRJNA1095825 248639 249 0.875 2.17875 Bacteria 2 Bacteria Bacteria 155 2.8199999999999992e-43   NR NTU60954.1 2052147 g245576 i0 91.5 1.97590361445783 82 7 98.8 0 3 248 227 308 NTU60954.1 excinuclease ABC subunit C [Caldisericota bacterium] diamond 492 155 1 Bacteria Caldisericota/Cryosericota group Pseudomonadati Caldisericota         Caldisericota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;