RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1095825", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA1095825 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27794320 27794320 PRJNA1095825_P_NODE_242644_length_250_cov_0.870056_g239581_i0 PRJNA1095825 242644 250 0.870056 2.17514 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 101 1.04e-24   NR MBN9398412.1 2026720 g239581 i0 61.4 0.996 83 31 98.4 1 3 248 30 112 MBN9398412.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 249 101 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
28046734 28046734 PRJNA1095825_P_NODE_256565_length_248_cov_0.880000_g253502_i0 PRJNA1095825 256565 248 0.88 2.1824 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 108 2.17e-25   NR HSW96640.1 2973664 g253502 i0 71.2 2.39516129032258 66 19 79.8 0 199 2 1 66 HSW96640.1 hypothetical protein [Candidatus Saccharimonadales bacterium] diamond 594 108 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
30415523 30415523 PRJNA1095825_P_NODE_296213_length_241_cov_0.916667_g293150_i0 PRJNA1095825 296213 241 0.916667 2.20916747 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 146 3.06e-40   NR HMF52262.1 2973664 g293150 i0 82.3 0.983402489626556 79 14 98.3 0 239 3 44 122 HMF52262.1 hypothetical protein [Candidatus Saccharimonadales bacterium] diamond 237 146 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;