RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1095825", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Rifleibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Rifleibacteriota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA1095825 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19326875 19326875 PRJNA1095825_P_NODE_283036_length_243_cov_0.905882_g279973_i0 PRJNA1095825 283036 243 0.905882 2.20129326 Candidatus Rifleibacterium sp. 3022866 Bacteria Bacteria 166 9.04e-48   NR HOI92509.1 3022866 g279973 i0 93.8 0.987654320987654 80 5 98.8 0 2 241 310 389 HOI92509.1 arginine deiminase family protein [Candidatus Rifleibacterium sp.] diamond 240 166 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota       Candidatus Rifleibacterium Candidatus Rifleibacterium sp.
32754327 32754327 PRJNA1095825_P_NODE_294480_length_241_cov_0.916667_g291417_i0 PRJNA1095825 294480 241 0.916667 2.20916747 Candidatus Rifleibacteriota bacterium 2053586 Bacteria Bacteria 58.2 1.3e-7   NR MBI4862317.1 2053586 g291417 i0 40.5 1.9792531120332 79 47 98.3 0 237 1 318 396 MBI4862317.1 glycosyltransferase [Candidatus Rifleibacteriota bacterium] diamond 477 58.2 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota         Candidatus Rifleibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;