RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA1095825", tax_clade = "Amoebozoa" and tax_phylum = "Evosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Evosea · 6 ✖

tax_clade 1

  • Amoebozoa · 6 ✖

bioproject 1

  • PRJNA1095825 · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1019363 1019363 PRJNA1095825_P_NODE_201461_length_275_cov_1.940594_g198398_i0 PRJNA1095825 201461 275 1.940594 5.3366335 Didymium 5792 Evosea other_Eukaryota 344 3.72e-90   NTclustered gi|2687|emb|X60210.1| 5793 g198398 i0 89.493 7.80727272727273 276 24 99 4 1 274 1908 2180 D.iridis LSU rRNA gene blastn 2147 344 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium iridis
17597398 17597398 PRJNA1095825_P_NODE_57674_length_501_cov_1.306075_g54613_i0 PRJNA1095825 57674 501 1.306075 6.54343575 Didymium 5792 Evosea other_Eukaryota 525 2.399999999999999e-144   NTclustered gi|2687|emb|X60210.1| 5793 g54613 i0 85.658 27.4710578842315 509 61 100 10 1 501 2845 2341 D.iridis LSU rRNA gene blastn 13763 525 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium iridis
18052888 18052888 PRJNA1095825_P_NODE_297535_length_241_cov_0.916667_g294472_i0 PRJNA1095825 297535 241 0.916667 2.20916747 Didymium nigripes 75757 Evosea other_Eukaryota 246 9.27e-61   NTclustered gi|10443803|gb|AF239230.1|AF239230 75757 g294472 i0 88.614 61.6804979253112 202 23 84 0 1 202 1038 837 Didymium nigripes small subunit ribosomal RNA gene, partial sequence blastn 14865 246 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium nigripes
27058973 27058973 PRJNA1095825_P_NODE_271462_length_245_cov_0.895349_g268399_i0 PRJNA1095825 271462 245 0.895349 2.19360505 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 92 1.74e-19   NR KAF2069315.1 133409 g268399 i0 56.3 4.83673469387755 80 35 98 0 242 3 366 445 KAF2069315.1 hypothetical protein CYY_009368 [Polysphondylium violaceum] diamond 1185 92.4 0.995670995670996 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
27447108 27447108 PRJNA1095825_P_NODE_250263_length_249_cov_0.875000_g247200_i0 PRJNA1095825 250263 249 0.875 2.17875 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 66.2 1.59e-10   NR KAH3767016.1 1580589 g247200 i0 54.7 0.63855421686747 53 24 63.9 0 11 169 240 292 KAH3767016.1 inorganic pyrophosphatase, mitochondrial [Pelomyxa schiedti] diamond 159 66.2 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
30690793 30690793 PRJNA1095825_P_NODE_190733_length_283_cov_1.466667_g187670_i0 PRJNA1095825 190733 283 1.466667 4.15066761 Eumycetozoa 142796 Evosea other_Eukaryota 108 5.6999999999999995e-25   NR XP_638501.1 352472 g187670 i0 51.1 1.92932862190813 92 45 97.5 0 281 6 586 677 XP_638501.1 glycyl-tRNA synthetase [Dictyostelium discoideum AX4] diamond 546 109 0.990825688073395 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;