RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA1093380" and tax_phylum = "Chlamydiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1093380 · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11222647 11222647 PRJNA1093380_P_NODE_16329_length_242_cov_1.615385_g16223_i0 PRJNA1093380 16329 242 1.615385 3.9092317 Chlamydiales bacterium 2047757 Bacteria Bacteria 149 1.9199999999999998e-42   NR MFI5334950.1 2047757 g16223 i0 92.5 3.96694214876033 80 6 99.2 0 2 241 178 257 MFI5334950.1 succinate--CoA ligase subunit alpha [Chlamydiales bacterium] diamond 960 149 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
19324840 19324840 PRJNA1093380_P_NODE_17076_length_241_cov_0.916667_g16970_i0 PRJNA1093380 17076 241 0.916667 2.20916747 Parachlamydiales bacterium 2052178 Bacteria Bacteria 346 8.89e-91   NTclustered gi|2874253890|emb|OY970065.1| 2052178 g16970 i0 92.857 85.9128630705394 238 17 99 0 4 241 627975 627738 MAG: Parachlamydiales bacterium isolate MFD09286.bin.c.6 genome assembly, chromosome: 1 blastn 20705 346 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales     Parachlamydiales bacterium
27573137 27573137 PRJNA1093380_P_NODE_17004_length_241_cov_0.916667_g16898_i0 PRJNA1093380 17004 241 0.916667 2.20916747 Chlamydiales bacterium 2047757 Bacteria Bacteria 127 3.48e-33   NR MFI5335116.1 2047757 g16898 i0 78.5 0.983402489626556 79 17 98.3 0 3 239 12 90 MFI5335116.1 helix-hairpin-helix domain-containing protein [Chlamydiales bacterium] diamond 237 127 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
28899058 28899058 PRJNA1093380_P_NODE_8388_length_271_cov_1.494949_g8282_i0 PRJNA1093380 8388 271 1.494949 4.05131179 Chlamydiales bacterium 2047757 Bacteria Bacteria 153 6.6e-45   NR MFI5333839.1 2047757 g8282 i0 80 0.996309963099631 90 18 99.6 0 2 271 85 174 MFI5333839.1 hypothetical protein [Chlamydiales bacterium] diamond 270 153 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
31458218 31458218 PRJNA1093380_P_NODE_16856_length_241_cov_0.916667_g16750_i0 PRJNA1093380 16856 241 0.916667 2.20916747 Chlamydiales bacterium 2047757 Bacteria Bacteria 137 1.89e-38   NR MFI5333591.1 2047757 g16750 i0 87.3 1.96680497925311 79 10 98.3 0 4 240 142 220 MFI5333591.1 UMP kinase [Chlamydiales bacterium] diamond 474 137 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;