contig_metadata
14 rows where bioproject = "PRJNA1093380" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 14227912 | 14227912 | PRJNA1093380_P_NODE_6432_length_283_cov_0.971429_g6326_i0 | PRJNA1093380 | 6432 | 283 | 0.971429 | 2.74914407 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 112 | 2.69e-26 | NR | HEY8280308.1 | 3034175 | g6326 | i0 | 61.1 | 0.954063604240283 | 90 | 27 | 94.3 | 2 | 272 | 6 | 558 | 640 | HEY8280308.1 MG2 domain-containing protein [Bdellovibrionota bacterium] | diamond | 270 | 112 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 17596974 | 17596974 | PRJNA1093380_P_NODE_234_length_1157_cov_2.727860_g174_i0 | PRJNA1093380 | 234 | 1157 | 2.72786 | 31.5613402 | Peredibacter | 263370 | Bacteria | Bacteria | 1940 | 0 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g174 | i0 | 96.975 | 239.404494382022 | 1157 | 32 | 100 | 2 | 1 | 1157 | 512411 | 511258 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 276991 | 1945 | 0.997429305912596 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 26655847 | 26655847 | PRJNA1093380_P_NODE_14321_length_246_cov_1.780347_g14215_i0 | PRJNA1093380 | 14321 | 246 | 1.780347 | 4.37965362 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 99.4 | 4.67e-22 | NR | HEY8278479.1 | 3034175 | g14215 | i0 | 57.3 | 1 | 82 | 35 | 100 | 0 | 246 | 1 | 474 | 555 | HEY8278479.1 TIGR03545 family protein [Bdellovibrionota bacterium] | diamond | 246 | 99.4 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 26687711 | 26687711 | PRJNA1093380_P_NODE_13241_length_248_cov_3.285714_g13135_i0 | PRJNA1093380 | 13241 | 248 | 3.285714 | 8.14857072 | Oligoflexia bacterium | 2599941 | Bacteria | Bacteria | 80.5 | 1.16e-16 | NR | MCO5143424.1 | 2599941 | g13135 | i0 | 49.4 | 0.955645161290323 | 79 | 38 | 95.6 | 1 | 9 | 245 | 6 | 82 | MCO5143424.1 RNA polymerase sigma factor [Oligoflexia bacterium] | diamond | 237 | 80.5 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Oligoflexia bacterium | |||||
| 28172934 | 28172934 | PRJNA1093380_P_NODE_12266_length_250_cov_1.740113_g12160_i0 | PRJNA1093380 | 12266 | 250 | 1.740113 | 4.3502825 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 146 | 8.12e-39 | NR | HEY8279679.1 | 3034175 | g12160 | i0 | 74.7 | 0.996 | 83 | 21 | 99.6 | 0 | 249 | 1 | 377 | 459 | HEY8279679.1 LTA synthase family protein [Bdellovibrionota bacterium] | diamond | 249 | 146 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 28172935 | 28172935 | PRJNA1093380_P_NODE_14886_length_245_cov_1.383721_g14780_i0 | PRJNA1093380 | 14886 | 245 | 1.383721 | 3.39011645 | Bacteriovorax stolpii | 960 | Bacteria | Bacteria | 99.8 | 4.859999999999999e-24 | NR | WP_142409524.1 | 960 | g14780 | i0 | 61.1 | 0.881632653061225 | 72 | 27 | 88.2 | 1 | 245 | 30 | 60 | 130 | WP_142409524.1 hypothetical protein [Bacteriovorax stolpii] | diamond | 216 | 99.8 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 28646755 | 28646755 | PRJNA1093380_P_NODE_15467_length_244_cov_0.900585_g15361_i0 | PRJNA1093380 | 15467 | 244 | 0.900585 | 2.1974274 | Pseudobdellovibrionaceae bacterium | 2026715 | Bacteria | Bacteria | 74.3 | 1.23e-13 | NR | MAF90226.1 | 2026715 | g15361 | i0 | 50.8 | 0.774590163934426 | 63 | 31 | 77.5 | 0 | 55 | 243 | 16 | 78 | MAF90226.1 hypothetical protein [Pseudobdellovibrionaceae bacterium] | diamond | 189 | 74.3 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrionaceae bacterium | |||
| 29246482 | 29246482 | PRJNA1093380_P_NODE_13469_length_248_cov_0.880000_g13363_i0 | PRJNA1093380 | 13469 | 248 | 0.88 | 2.1824 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 137 | 4.23e-36 | NR | HEY8278945.1 | 3034175 | g13363 | i0 | 87.7 | 0.979838709677419 | 81 | 10 | 98 | 0 | 244 | 2 | 275 | 355 | HEY8278945.1 flagellar biosynthesis protein FlhF [Bdellovibrionota bacterium] | diamond | 243 | 137 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 29341371 | 29341371 | PRJNA1093380_P_NODE_5289_length_289_cov_2.620370_g5183_i0 | PRJNA1093380 | 5289 | 289 | 2.62037 | 7.5728693 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 173 | 3.49e-50 | NR | HEY8278955.1 | 3034175 | g5183 | i0 | 93.8 | 0.996539792387543 | 96 | 6 | 99.7 | 0 | 288 | 1 | 311 | 406 | HEY8278955.1 flagellar hook protein FlgE [Bdellovibrionota bacterium] | diamond | 288 | 173 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 29372882 | 29372882 | PRJNA1093380_P_NODE_8189_length_272_cov_1.547739_g8083_i0 | PRJNA1093380 | 8189 | 272 | 1.547739 | 4.20985008 | Bdellovibrionia bacterium | 3034169 | Bacteria | Bacteria | 94.7 | 2.37e-20 | NR | MFL5812468.1 | 3034169 | g8083 | i0 | 86.5 | 0.573529411764706 | 52 | 7 | 57.4 | 0 | 115 | 270 | 2 | 53 | MFL5812468.1 4Fe-4S binding protein [Bdellovibrionia bacterium] | diamond | 156 | 94.7 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionia bacterium | |||||
| 30794200 | 30794200 | PRJNA1093380_P_NODE_13274_length_248_cov_2.251429_g13168_i0 | PRJNA1093380 | 13274 | 248 | 2.251429 | 5.58354392 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 155 | 7.289999999999999e-45 | NR | HEY8278974.1 | 3034175 | g13168 | i0 | 86.6 | 0.991935483870968 | 82 | 11 | 99.2 | 0 | 248 | 3 | 46 | 127 | HEY8278974.1 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein [Bdellovibrionota bacterium] | diamond | 246 | 155 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 30794201 | 30794201 | PRJNA1093380_P_NODE_14234_length_247_cov_0.873563_g14128_i0 | PRJNA1093380 | 14234 | 247 | 0.873563 | 2.15770061 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 103 | 1.2e-26 | NR | HEY8279491.1 | 3034175 | g14128 | i0 | 75.8 | 0.753036437246964 | 62 | 15 | 75.3 | 0 | 62 | 247 | 21 | 82 | HEY8279491.1 metal-sulfur cluster assembly factor [Bdellovibrionota bacterium] | diamond | 186 | 103 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 31331505 | 31331505 | PRJNA1093380_P_NODE_9936_length_262_cov_1.677249_g9830_i0 | PRJNA1093380 | 9936 | 262 | 1.677249 | 4.39439238 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 130 | 6.63e-33 | NR | MDZ4083535.1 | 2053517 | g9830 | i0 | 69.8 | 18.7099236641221 | 86 | 26 | 98.5 | 0 | 260 | 3 | 862 | 947 | MDZ4083535.1 alpha-2-macroglobulin family protein [Bdellovibrionales bacterium] | diamond | 4902 | 130 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 32154082 | 32154082 | PRJNA1093380_P_NODE_16138_length_243_cov_0.905882_g16032_i0 | PRJNA1093380 | 16138 | 243 | 0.905882 | 2.20129326 | Oligoflexus sp. | 1971216 | Bacteria | Bacteria | 106 | 2.45e-25 | NR | WP_325144519.1 | 1971216 | g16032 | i0 | 58.7 | 1.91358024691358 | 75 | 31 | 92.6 | 0 | 3 | 227 | 30 | 104 | WP_325144519.1 S66 peptidase family protein [Oligoflexus sp.] | diamond | 465 | 106 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Oligoflexales | Oligoflexaceae | Oligoflexus | Oligoflexus sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;