RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1093380" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Methanobacteriati · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1093380 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28646754 28646754 PRJNA1093380_P_NODE_14467_length_246_cov_0.890173_g14361_i0 PRJNA1093380 14467 246 0.890173 2.18982558 Methanosarcina siciliae 38027 Archaea Archaea 105 1.79e-24   NR WP_187151736.1 38027 g14361 i0 64.1 1.89024390243902 78 28 95.1 0 244 11 55 132 WP_187151736.1 hypothetical protein [Methanosarcina siciliae] diamond 465 105 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina siciliae
29499073 29499073 PRJNA1093380_P_NODE_5810_length_286_cov_1.647887_g5704_i0 PRJNA1093380 5810 286 1.647887 4.71295682 Methanobacteriota archaeon 2026739 Archaea Archaea 109 3.71e-26   NR MDA7555468.1 2026739 g5704 i0 61.8 1.59440559440559 76 29 79.7 0 3 230 284 359 MDA7555468.1 aldo/keto reductase [Methanobacteriota archaeon] diamond 456 109 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;