RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1093380", tax_kingdom = "Metazoa" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1093380 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20600124 20600124 PRJNA1093380_P_NODE_12737_length_249_cov_2.318182_g12631_i0 PRJNA1093380 12737 249 2.318182 5.77227318 Opisthokonta 33154 Porifera other_Eukaryota 120 5.619999999999999e-31   NR XP_062520409.1 121492 g12631 i0 72.3 28 83 23 100 0 249 1 35 117 XP_062520409.1 large ribosomal subunit protein uL10-like [Corticium candelabrum] diamond 6972 120 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Plakinidae Corticium Corticium candelabrum
28804266 28804266 PRJNA1093380_P_NODE_16428_length_242_cov_0.911243_g16322_i0 PRJNA1093380 16428 242 0.911243 2.20520806 Amphimedon queenslandica 400682 Porifera other_Eukaryota 47.4 8.25e-4   NR XP_019861445.1 400682 g16322 i0 35.7 3.54545454545455 70 34 83.1 3 228 28 303 364 XP_019861445.1 PREDICTED: probable E3 ubiquitin-protein ligase ARI8 [Amphimedon queenslandica] diamond 858 47.4 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Haplosclerida Niphatidae Amphimedon Amphimedon queenslandica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;