RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1093380", tax_kingdom = "Metazoa" and tax_phylum = "Platyhelminthes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1093380 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13772617 13772617 PRJNA1093380_P_NODE_8291_length_271_cov_5.388889_g8185_i0 PRJNA1093380 8291 271 5.388889 14.60388919 Metazoa 33208 Platyhelminthes Platyhelminthes 237 6.390000000000001e-58   NTclustered gi|684409697|ref|XM_009177568.1| 6198 g8185 i0 82.528 97.1660516605166 269 47 99 0 3 271 1016 748 Opisthorchis viverrini hypothetical protein partial mRNA blastn 26332 237 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Opisthorchiida Opisthorchiidae Opisthorchis Opisthorchis viverrini
31521459 31521459 PRJNA1093380_P_NODE_4156_length_310_cov_2.696203_g4050_i0 PRJNA1093380 4156 310 2.696203 8.3582293 Schistosoma mansoni 6183 Platyhelminthes Platyhelminthes 58.2 3.02e-7   NR AAB63442.1 6183 g4050 i0 58.5 1.23870967741935 41 17 39.7 0 301 179 213 253 AAB63442.1 aspartic proteinase, partial [Schistosoma mansoni] diamond 384 58.2 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;