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contig_metadata

18 rows where bioproject = "PRJNA1093380", tax_clade = "Sar" and tax_phylum = "Oomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Oomycota · 18 ✖

tax_clade 1

  • Sar · 18 ✖

bioproject 1

  • PRJNA1093380 · 18 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1473771 1473771 PRJNA1093380_P_NODE_5922_length_286_cov_1.084507_g5816_i0 PRJNA1093380 5922 286 1.084507 3.10169002 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 213 1.15e-50   NTclustered gi|2795040101|ref|XM_067937224.1| 4785 g5816 i0 85.366 295.524475524476 205 30 72 0 79 283 683 479 Phytophthora cinnamomi Polyubiquitin (IUM83_12589), partial mRNA blastn 84520 213 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
4025914 4025914 PRJNA1093380_P_NODE_9704_length_264_cov_1.209424_g9598_i0 PRJNA1093380 9704 264 1.209424 3.19287936 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 148 2.9899999999999995e-31   NTclustered gi|166043101|emb|CU357747.1| 100861 g9598 i0 84.314 3.92045454545455 153 22 58 2 16 167 742 893 Aphanomyces euteiches cDNA blastn 1035 148 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
7851979 7851979 PRJNA1093380_P_NODE_9227_length_266_cov_2.155440_g9121_i0 PRJNA1093380 9227 266 2.15544 5.7334704 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 134 4.36e-34   NR KAG1700969.1 4784 g9121 i0 76.1 17.8646616541353 88 21 99.2 0 264 1 781 868 KAG1700969.1 hypothetical protein DVH05_011213 [Phytophthora capsici] diamond 4752 134 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora capsici
9947474 9947474 PRJNA1093380_P_NODE_9708_length_264_cov_1.209424_g9602_i0 PRJNA1093380 9708 264 1.209424 3.19287936 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 127 2.9899999999999997e-35   NR KAJ0400315.1 114742 g9602 i0 72.4 6.92045454545455 87 24 98.9 0 262 2 35 121 KAJ0400315.1 hypothetical protein P43SY_002063 [Pythium insidiosum] diamond 1827 127 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
14227843 14227843 PRJNA1093380_P_NODE_17032_length_241_cov_0.916667_g16926_i0 PRJNA1093380 17032 241 0.916667 2.20916747 Saprolegnia parasitica 101203 SAR_Eukaryotes SAR_Eukaryotes 156 1.6100000000000002e-33   NTclustered gi|813142527|ref|XM_012343931.1| 695850 g16926 i0 79.452 98.6721991701245 219 45 91 0 1 219 441 659 Saprolegnia parasitica CBS 223.65 60S ribosomal protein L3 mRNA blastn 23780 156 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
14227915 14227915 PRJNA1093380_P_NODE_6832_length_280_cov_1.487923_g6726_i0 PRJNA1093380 6832 280 1.487923 4.1661844 Saprolegnia parasitica 101203 SAR_Eukaryotes SAR_Eukaryotes 230 1.1099999999999995e-55   NTclustered gi|813102101|ref|XM_012338325.1| 695850 g6726 i0 83.27 62.4535714285714 263 30 91 10 1 256 516 261 Saprolegnia parasitica CBS 223.65 ATP synthase subunit beta partial mRNA blastn 17487 230 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
20600146 20600146 PRJNA1093380_P_NODE_14697_length_246_cov_0.890173_g14591_i0 PRJNA1093380 14697 246 0.890173 2.18982558 root 1 Root_unresolved Root_unresolved 162 4.69e-44   NR KAK1930851.1 4793 g14591 i0 93.8 17.780487804878 81 5 98.8 0 2 244 1284 1364 KAK1930851.1 Eukaryotic initiation factor 4A-III [Phytophthora citrophthora] diamond 4374 162 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora citrophthora
20600214 20600214 PRJNA1093380_P_NODE_3257_length_337_cov_1.375000_g3151_i0 PRJNA1093380 3257 337 1.375 4.63375 Albugo 65356 SAR_Eukaryotes SAR_Eukaryotes 190 4.810000000000001e-59   NR KAL0583279.1 65357 g3151 i0 80.2 2.83976261127596 106 21 94.4 0 19 336 1 106 KAL0583279.1 hypothetical protein ABG067_006780 [Albugo candida] diamond 957 190 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo candida
20600229 20600229 PRJNA1093380_P_NODE_4457_length_304_cov_1.939394_g4351_i0 PRJNA1093380 4457 304 1.939394 5.89575776 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 180 3.989999999999999e-52   NR KAF0715182.1 112090 g4351 i0 92.1 3.98684210526316 101 8 99.7 0 2 304 227 327 KAF0715182.1 hypothetical protein AaE_011386 [Aphanomyces astaci] diamond 1212 180 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
23151461 23151461 PRJNA1093380_P_NODE_3439_length_330_cov_2.311284_g3333_i0 PRJNA1093380 3439 330 2.311284 7.6272372 Aphanomyces sinensis 1125843 SAR_Eukaryotes SAR_Eukaryotes 283 1.01e-71   NTclustered gi|2813228406|dbj|LC754346.1| 1125843 g3333 i0 82.335 94.0272727272727 334 51 100 7 1 330 513 184 Aphanomyces sinensis NBRC 106581 btub gene for beta-tubulin, partial cds blastn 31029 283 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces sinensis
23151567 23151567 PRJNA1093380_P_NODE_899_length_586_cov_0.820663_g796_i0 PRJNA1093380 899 586 0.820663 4.80908518 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 342 1.33e-112   NR XP_024578065.1 4781 g796 i0 85.6 10.981228668942 195 28 99.8 0 586 2 148 342 XP_024578065.1 heat shock protein 90 [Plasmopara halstedii] diamond 6435 345 0.991304347826087 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Plasmopara Plasmopara halstedii
27817287 27817287 PRJNA1093380_P_NODE_11864_length_251_cov_1.376404_g11758_i0 PRJNA1093380 11864 251 1.376404 3.45477404 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 128 3.5600000000000004e-33   NR POM63389.1 4796 g11758 i0 77.1 6.94422310756972 83 19 99.2 0 250 2 146 228 POM63389.1 Isocitrate lyase, partial [Phytophthora palmivora] diamond 1743 128 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora palmivora
28164445 28164445 PRJNA1093380_P_NODE_12725_length_249_cov_2.522727_g12619_i0 PRJNA1093380 12725 249 2.522727 6.28159023 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 112 2.25e-27   NR ETL95768.1 4792 g12619 i0 65.1 10 83 29 100 0 249 1 126 208 ETL95768.1 hypothetical protein L917_06488 [Phytophthora nicotianae] diamond 2490 112 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora nicotianae
28322226 28322226 PRJNA1093380_P_NODE_15226_length_245_cov_0.895349_g15120_i0 PRJNA1093380 15226 245 0.895349 2.19360505 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 92.4 1.26e-19   NR TYZ58888.1 1485010 g15120 i0 63.2 3.69795918367347 76 28 93.1 0 17 244 819 894 TYZ58888.1 hypothetical protein PybrP1_008177 [[Pythium] brassicae (nom. inval.)] diamond 906 92.8 0.995689655172414 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium [Pythium] brassicae (nom. inval.)
29246483 29246483 PRJNA1093380_P_NODE_1469_length_458_cov_0.885714_g1364_i0 PRJNA1093380 1469 458 0.885714 4.05657012 Hyaloperonospora brassicae 162125 SAR_Eukaryotes SAR_Eukaryotes 45.1 0.0169   NR CAI5730517.1 162125 g1364 i0 32.4 0.445414847161572 68 41 44.5 1 37 240 35 97 CAI5730517.1 unnamed protein product [Hyaloperonospora brassicae] diamond 204 45.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Hyaloperonospora Hyaloperonospora brassicae
29553426 29553426 PRJNA1093380_P_NODE_14410_length_246_cov_0.890173_g14304_i0 PRJNA1093380 14410 246 0.890173 2.18982558 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 100 5.78e-24   NR XP_009831264.1 112090 g14304 i0 62.7 6.52439024390244 75 28 91.5 0 245 21 33 107 XP_009831264.1 hypothetical protein H257_07436 [Aphanomyces astaci] diamond 1605 100 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
30762800 30762800 PRJNA1093380_P_NODE_8394_length_271_cov_1.419192_g8288_i0 PRJNA1093380 8394 271 1.419192 3.84601032 Globisporangium splendens 82926 SAR_Eukaryotes SAR_Eukaryotes 65.9 3.66e-10   NR KAF1319583.1 82926 g8288 i0 39.6 2.8450184501845 91 47 96.3 2 266 6 372 458 KAF1319583.1 hypothetical protein FI667_g13067, partial [Globisporangium splendens] diamond 771 65.9 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium splendens
32871620 32871620 PRJNA1093380_P_NODE_10440_length_259_cov_1.666667_g10334_i0 PRJNA1093380 10440 259 1.666667 4.31666753 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 90.9 5.45e-19   NR OQS06019.1 74557 g10334 i0 61.3 3.59073359073359 62 24 71.8 0 7 192 1548 1609 OQS06019.1 hypothetical protein THRCLA_01913 [Thraustotheca clavata] diamond 930 91.7 0.991275899672846 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;