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contig_metadata

19 rows where bioproject = "PRJNA1093380", tax_clade = "PVC group" and tax_phylum = "Planctomycetota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Planctomycetota · 19 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 19 ✖

bioproject 1

  • PRJNA1093380 · 19 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2749917 2749917 PRJNA1093380_P_NODE_6423_length_283_cov_1.100000_g6317_i0 PRJNA1093380 6423 283 1.1 3.113 Urbifossiella limnaea 2528023 Bacteria Bacteria 276 1.4199999999999999e-69   NTclustered gi|1712585314|gb|CP036273.1| 2528023 g6317 i0 87.045 78.3003533568905 247 28 87 4 1 245 2018907 2019151 Urbifossiella limnaea strain ETA_A1 chromosome, complete genome blastn 22159 276 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae Urbifossiella Urbifossiella limnaea
5302102 5302102 PRJNA1093380_P_NODE_925_length_575_cov_1.735060_g822_i0 PRJNA1093380 925 575 1.73506 9.976595 uncultured Planctomycetota bacterium 120965 Bacteria Bacteria 830 0   NTclustered gi|2874254043|emb|OY970367.1| 120965 g822 i0 92.696 207.737391304348 575 42 100 0 1 575 3454218 3453644 MAG: uncultured Planctomycetota bacterium isolate MFD04580.bin.c.2 genome assembly, chromosome: 1 blastn 119449 830 1 Bacteria PVC group Pseudomonadati Planctomycetota         uncultured Planctomycetota bacterium
7851856 7851856 PRJNA1093380_P_NODE_1727_length_428_cov_1.636620_g1621_i0 PRJNA1093380 1727 428 1.63662 7.0047336 uncultured Planctomycetota bacterium 120965 Bacteria Bacteria 791 0   NTclustered gi|55975911|gb|AY802942.1| 120965 g1621 i0 100 99.6144859813084 428 0 100 0 1 428 76 503 Uncultured planctomycete clone FPln-22 16S ribosomal RNA gene, partial sequence blastn 42635 791 1 Bacteria PVC group Pseudomonadati Planctomycetota         uncultured Planctomycetota bacterium
9126822 9126822 PRJNA1093380_P_NODE_2388_length_375_cov_3.728477_g2282_i0 PRJNA1093380 2388 375 3.728477 13.98178875 uncultured Planctomycetota bacterium 120965 Bacteria Bacteria 649 0   NTclustered gi|2874254043|emb|OY970367.1| 120965 g2282 i0 97.878 158.173333333333 377 4 100 4 1 375 3454589 3454215 MAG: uncultured Planctomycetota bacterium isolate MFD04580.bin.c.2 genome assembly, chromosome: 1 blastn 59315 649 1 Bacteria PVC group Pseudomonadati Planctomycetota         uncultured Planctomycetota bacterium
14227838 14227838 PRJNA1093380_P_NODE_16752_length_241_cov_1.833333_g16646_i0 PRJNA1093380 16752 241 1.833333 4.41833253 uncultured Phycisphaerales bacterium 904075 Bacteria Bacteria 307 4.1900000000000005e-79   NTclustered gi|2874253847|emb|OY969903.1| 904075 g16646 i0 90 6.51452282157676 250 7 100 13 1 241 1830896 1830656 MAG: uncultured Phycisphaerales bacterium isolate MFD01213.bin.c.1 genome assembly, chromosome: 1 blastn 1570 307 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     uncultured Phycisphaerales bacterium
14227870 14227870 PRJNA1093380_P_NODE_2692_length_360_cov_3.027875_g2586_i0 PRJNA1093380 2692 360 3.027875 10.90035 Anatilimnocola aggregata 2528021 Bacteria Bacteria 593 4.519999999999998e-165   NTclustered gi|1712591889|gb|CP036274.1| 2528021 g2586 i0 96.893 116.333333333333 354 11 98 0 1 354 7628522 7628875 Anatilimnocola aggregata strain ETA_A8 chromosome, complete genome blastn 41880 593 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae Anatilimnocola Anatilimnocola aggregata
16776248 16776248 PRJNA1093380_P_NODE_2014_length_402_cov_2.577508_g1908_i0 PRJNA1093380 2014 402 2.577508 10.36158216 uncultured Planctomycetota bacterium 120965 Bacteria Bacteria 616 1.0899999999999995e-171   NTclustered gi|2874254043|emb|OY970367.1| 120965 g1908 i0 94.71 476.310945273632 397 19 99 2 1 396 3454578 3454973 MAG: uncultured Planctomycetota bacterium isolate MFD04580.bin.c.2 genome assembly, chromosome: 1 blastn 191477 616 1 Bacteria PVC group Pseudomonadati Planctomycetota         uncultured Planctomycetota bacterium
20600198 20600198 PRJNA1093380_P_NODE_2037_length_400_cov_1.853211_g1931_i0 PRJNA1093380 2037 400 1.853211 7.412844 Urbifossiella limnaea 2528023 Bacteria Bacteria 575 1.8399999999999994e-159   NTclustered gi|1712585314|gb|CP036273.1| 2528023 g1931 i0 92.556 128.4825 403 26 100 4 1 400 2019829 2019428 Urbifossiella limnaea strain ETA_A1 chromosome, complete genome blastn 51393 575 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae Urbifossiella Urbifossiella limnaea
20600212 20600212 PRJNA1093380_P_NODE_3117_length_343_cov_1.140741_g3011_i0 PRJNA1093380 3117 343 1.140741 3.91274163 uncultured Gemmataceae bacterium 1914239 Bacteria Bacteria 449 9.84e-122   NTclustered gi|2874253749|emb|OY969623.1| 1914239 g3011 i0 90.23 158.00583090379 348 29 100 3 1 343 7050955 7050608 MAG: uncultured Gemmataceae bacterium isolate MFD06742.bin.c.1 genome assembly, chromosome: 1 blastn 54196 449 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae   uncultured Gemmataceae bacterium
23151322 23151322 PRJNA1093380_P_NODE_10199_length_261_cov_1.079787_g10093_i0 PRJNA1093380 10199 261 1.079787 2.81824407 uncultured Gemmataceae bacterium 1914239 Bacteria Bacteria 359 1.25e-94   NTclustered gi|2874253853|emb|OY969909.1| 1914239 g10093 i0 92.157 183.528735632184 255 18 97 2 8 261 2002781 2002528 MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 blastn 47901 359 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae   uncultured Gemmataceae bacterium
24425089 24425089 PRJNA1093380_P_NODE_4440_length_304_cov_8.086580_g4334_i0 PRJNA1093380 4440 304 8.08658 24.5832032 uncultured Gemmataceae bacterium 1914239 Bacteria Bacteria 318 2.53e-82   NTclustered gi|2874253749|emb|OY969623.1| 1914239 g4334 i0 87.868 145.118421052632 272 31 89 2 2 271 7053161 7053432 MAG: uncultured Gemmataceae bacterium isolate MFD06742.bin.c.1 genome assembly, chromosome: 1 blastn 44116 318 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae   uncultured Gemmataceae bacterium
24425131 24425131 PRJNA1093380_P_NODE_7280_length_277_cov_1.544118_g7174_i0 PRJNA1093380 7280 277 1.544118 4.27720686 uncultured Phycisphaerales bacterium 904075 Bacteria Bacteria 222 1.84e-53   NTclustered gi|2874253847|emb|OY969903.1| 904075 g7174 i0 82.182 12.8158844765343 275 33 99 7 1 275 1831181 1831439 MAG: uncultured Phycisphaerales bacterium isolate MFD01213.bin.c.1 genome assembly, chromosome: 1 blastn 3550 222 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     uncultured Phycisphaerales bacterium
28299265 28299265 PRJNA1093380_P_NODE_8286_length_272_cov_0.909548_g8180_i0 PRJNA1093380 8286 272 0.909548 2.47397056 Planctomycetota bacterium 2026780 Bacteria Bacteria 43.9 0.0187   NR MBN1809450.1 2026780 g8180 i0 42.6 0.672794117647059 61 28 61.8 3 36 203 52 110 MBN1809450.1 helix-turn-helix transcriptional regulator [Planctomycetota bacterium] diamond 183 43.9 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
29206553 29206553 PRJNA1093380_P_NODE_17329_length_237_cov_3.475610_g17223_i0 PRJNA1093380 17329 237 3.47561 8.2371957 Singulisphaera 466152 Bacteria Bacteria 80.9 1.03e-15   NR WP_074317405.1 1882752 g17223 i0 56.4 4.93670886075949 78 34 98.7 0 236 3 40 117 WP_074317405.1 3-dehydroquinate synthase [Singulisphaera sp. GP187] diamond 1170 81.3 0.995079950799508 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Isosphaerales Isosphaeraceae Singulisphaera Singulisphaera sp. GP187
29246481 29246481 PRJNA1093380_P_NODE_12389_length_250_cov_0.870056_g12283_i0 PRJNA1093380 12389 250 0.870056 2.17514 Gemmataceae bacterium 2052164 Bacteria Bacteria 112 3.78e-27   NR HEX5272822.1 2052164 g12283 i0 69.5 0.984 82 24 98.4 1 3 248 176 256 HEX5272822.1 DUF1501 domain-containing protein [Gemmataceae bacterium] diamond 246 112 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae   Gemmataceae bacterium
29972803 29972803 PRJNA1093380_P_NODE_16731_length_241_cov_2.333333_g16625_i0 PRJNA1093380 16731 241 2.333333 5.62333253 Gemmataceae bacterium 2052164 Bacteria Bacteria 80.9 9.87e-16   NR HZU34943.1 2052164 g16625 i0 51.3 0.995850622406639 80 39 99.6 0 1 240 218 297 HZU34943.1 ATP-binding protein [Gemmataceae bacterium] diamond 240 80.9 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae   Gemmataceae bacterium
30532845 30532845 PRJNA1093380_P_NODE_5093_length_291_cov_1.068807_g4987_i0 PRJNA1093380 5093 291 1.068807 3.11022837 Bacteria 2 Bacteria Bacteria 43.5 0.0362   NR PHX78409.1 2026779 g4987 i0 64 1.03092783505155 25 9 25.8 0 88 162 547 571 PHX78409.1 MAG: hypothetical protein CK544_02960 [Planctomycetaceae bacterium] diamond 300 43.5 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae   Planctomycetaceae bacterium
31141470 31141470 PRJNA1093380_P_NODE_11115_length_255_cov_2.285714_g11009_i0 PRJNA1093380 11115 255 2.285714 5.8285707 Gemmataceae bacterium 2052164 Bacteria Bacteria 60.5 2.57e-8   NR HVK07542.1 2052164 g11009 i0 68.8 1.88235294117647 48 14 55.3 1 141 1 2 49 HVK07542.1 PVC-type heme-binding CxxCH protein [Gemmataceae bacterium] diamond 480 60.5 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae   Gemmataceae bacterium
32785634 32785634 PRJNA1093380_P_NODE_15340_length_244_cov_1.801170_g15234_i0 PRJNA1093380 15340 244 1.80117 4.3948548 Gemmataceae bacterium 2052164 Bacteria Bacteria 116 2.33e-28   NR MFL5327527.1 2052164 g15234 i0 68.8 1.95491803278689 80 25 98.4 0 242 3 383 462 MFL5327527.1 aldehyde dehydrogenase family protein [Gemmataceae bacterium] diamond 477 116 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae   Gemmataceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;