contig_metadata
4 rows where bioproject = "PRJNA1093380", tax_clade = "Opisthokonta" and tax_phylum = "Nematoda"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4025796 | 4025796 | PRJNA1093380_P_NODE_17944_length_226_cov_2.013072_g17838_i0 | PRJNA1093380 | 17944 | 226 | 2.013072 | 4.54954272 | Loa loa | 7209 | Nematoda | Nematoda | 148 | 2.49e-31 | NTclustered | gi|1158593381|ref|XM_020445637.1| | 7209 | g17838 | i0 | 80.203 | 0.871681415929204 | 197 | 39 | 87 | 0 | 30 | 226 | 669 | 473 | Loa loa hypothetical protein mRNA | blastn | 197 | 148 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Onchocercidae | Loa | Loa loa | |
| 23151475 | 23151475 | PRJNA1093380_P_NODE_4339_length_307_cov_2.482906_g4233_i0 | PRJNA1093380 | 4339 | 307 | 2.482906 | 7.62252142 | Strongyloides ratti | 34506 | Nematoda | Nematoda | 276 | 1.5599999999999998e-69 | NTclustered | gi|1376144029|ref|XM_024652443.1| | 34506 | g4233 | i0 | 83.113 | 91.400651465798 | 302 | 51 | 98 | 0 | 1 | 302 | 650 | 349 | Strongyloides ratti Tubulin beta-2A chain (SRAE_2000148500), partial mRNA | blastn | 28060 | 276 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Strongyloididae | Strongyloides | Strongyloides ratti | |
| 24425097 | 24425097 | PRJNA1093380_P_NODE_5080_length_291_cov_1.610092_g4974_i0 | PRJNA1093380 | 5080 | 291 | 1.610092 | 4.68536772 | Bursaphelenchus xylophilus | 6326 | Nematoda | Nematoda | 189 | 1.97e-43 | NTclustered | gi|567773431|gb|KF739066.1| | 6326 | g4974 | i0 | 80.816 | 24.3676975945017 | 245 | 43 | 84 | 4 | 25 | 267 | 267 | 25 | Bursaphelenchus xylophilus isolate ZJZS FTT-2 protein mRNA, complete cds | blastn | 7091 | 189 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Aphelenchoididae | Bursaphelenchus | Bursaphelenchus xylophilus | |
| 27659408 | 27659408 | PRJNA1093380_P_NODE_5264_length_290_cov_1.064516_g5158_i0 | PRJNA1093380 | 5264 | 290 | 1.064516 | 3.0870964 | Metazoa | 33208 | Nematoda | Nematoda | 193 | 6.38e-60 | NR | MCP9264874.1 | 6287 | g5158 | i0 | 96.9 | 256.220689655172 | 96 | 3 | 99.3 | 0 | 289 | 2 | 58 | 153 | MCP9264874.1 Ras-related protein Rab-1A [Dirofilaria immitis] | diamond | 74304 | 194 | 0.994845360824742 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Onchocercidae | Dirofilaria | Dirofilaria immitis |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;