RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1093380", tax_clade = "Opisthokonta" and tax_phylum = "Cnidaria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA1093380 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6122291 6122291 PRJNA1093380_P_NODE_11445_length_253_cov_1.711111_g11339_i0 PRJNA1093380 11445 253 1.711111 4.32911083 Cnidaria 6073 Cnidaria other_Eukaryota 82.4 4.63e-17   NR XP_027056080.1 46731 g11339 i0 59.4 3.49802371541502 69 28 81.8 0 5 211 140 208 XP_027056080.1 vesicle-associated membrane protein 712-like [Pocillopora damicornis] diamond 885 83.2 0.990384615384615 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Pocillopora Pocillopora damicornis
15501723 15501723 PRJNA1093380_P_NODE_10713_length_257_cov_4.625000_g10607_i0 PRJNA1093380 10713 257 4.625 11.88625 Parvicapsula sp. SPS-2018 2806882 Cnidaria other_Eukaryota 122 1.7599999999999994e-23   NTclustered gi|1444845538|gb|MH729074.1| 2806882 g10607 i0 86.607 8.25291828793774 112 13 44 2 144 255 1978 1869 Parvicapsula sp. SPS-2018 isolate JejuCJGd-2018 large subunit ribosomal RNA gene, partial sequence blastn 2121 122 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Parvicapsulidae Parvicapsula Parvicapsula sp. SPS-2018
32808588 32808588 PRJNA1093380_P_NODE_8280_length_272_cov_1.160804_g8174_i0 PRJNA1093380 8280 272 1.160804 3.15738688 Porites 46719 Cnidaria other_Eukaryota 157 9.42e-43   NR CAH3018643.1 104178 g8174 i0 80 8.93382352941176 90 18 99.3 0 2 271 468 557 CAH3018643.1 unnamed protein product, partial [Porites evermanni] diamond 2430 157 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Poritidae Porites Porites evermanni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;