RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

8 rows where bioproject = "PRJNA1093380" and tax_clade = "Discoba"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 8 ✖

bioproject 1

  • PRJNA1093380 · 8 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1019121 1019121 PRJNA1093380_P_NODE_13601_length_248_cov_0.880000_g13495_i0 PRJNA1093380 13601 248 0.88 2.1824 Leishmania 5658 Euglenozoa other_Eukaryota 141 1.5599999999999999e-38   NR 6AZ3_C 5661 g13495 i0 81.7 16.8629032258065 82 15 99.2 0 246 1 27 108 6AZ3_C Chain C, Ribosomal protein L1a, putative [Leishmania donovani] diamond 4182 142 0.992957746478873 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania donovani
20600096 20600096 PRJNA1093380_P_NODE_11137_length_255_cov_1.692308_g11031_i0 PRJNA1093380 11137 255 1.692308 4.3153854 Kinetoplastea 5653 Euglenozoa other_Eukaryota 134 7.05e-37   NR EPY26751.1 59799 g11031 i0 79.5 3.67058823529412 78 16 91.8 0 235 2 3 80 EPY26751.1 small subunit ribosomal protein S4e [Angomonas deanei] diamond 936 134 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Angomonas Angomonas deanei
27352331 27352331 PRJNA1093380_P_NODE_9883_length_263_cov_0.810526_g9777_i0 PRJNA1093380 9883 263 0.810526 2.13168338 Trypanosoma rangeli SC58 429131 Euglenozoa other_Eukaryota 44.3 0.00916   NR ESL05026.1 429131 g9777 i0 53.8 0.444866920152091 39 15 41.1 1 155 48 43 81 ESL05026.1 hypothetical protein TRSC58_07379 [Trypanosoma rangeli SC58] diamond 117 44.3 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma rangeli
29647997 29647997 PRJNA1093380_P_NODE_8750_length_269_cov_1.571429_g8644_i0 PRJNA1093380 8750 269 1.571429 4.22714401 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 94.7 2.09e-21   NR EPY25432.1 59799 g8644 i0 59.6 10.8289962825279 89 36 99.3 0 269 3 56 144 EPY25432.1 large subunit ribosomal protein L7Ae [Angomonas deanei] diamond 2913 95.5 0.991623036649215 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Angomonas Angomonas deanei
30509921 30509921 PRJNA1093380_P_NODE_6953_length_279_cov_2.024272_g6847_i0 PRJNA1093380 6953 279 2.024272 5.64771888 Trypanosoma vivax Y486 1055687 Euglenozoa other_Eukaryota 44.7 0.0117   NR CCC50971.1 1055687 g6847 i0 33.9 0.666666666666667 62 41 66.7 0 3 188 228 289 CCC50971.1 RNA-binding regulatory protein (fragment) [Trypanosoma vivax Y486] diamond 186 44.7 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma vivax
31078806 31078806 PRJNA1093380_P_NODE_10775_length_257_cov_1.673913_g10669_i0 PRJNA1093380 10775 257 1.673913 4.30195641 Trypanosoma melophagium 715481 Euglenozoa other_Eukaryota 107 1.5600000000000002e-26   NR XP_067190936.1 715481 g10669 i0 60.2 0.968871595330739 83 33 96.9 0 9 257 17 99 XP_067190936.1 Ribosomal protein S3Ae [Trypanosoma melophagium] diamond 249 107 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma melophagium
31363343 31363343 PRJNA1093380_P_NODE_15536_length_244_cov_0.900585_g15430_i0 PRJNA1093380 15536 244 0.900585 2.1974274 Acrasis kona 1008807 Heterolobosea other_Eukaryota 96.3 1.02e-21   NR KAL0489712.1 1008807 g15430 i0 71.2 1.62295081967213 66 15 81.1 1 242 45 252 313 KAL0489712.1 heterotrimeric G-protein beta subunit [Acrasis kona] diamond 396 96.3 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
32596981 32596981 PRJNA1093380_P_NODE_17400_length_236_cov_2.938650_g17294_i0 PRJNA1093380 17400 236 2.93865 6.935214 Strigomonas culicis 28005 Euglenozoa other_Eukaryota 73.6 4.72e-13   NR EPY34696.1 28005 g17294 i0 50.6 0.978813559322034 77 38 97.9 0 1 231 505 581 EPY34696.1 hypothetical protein STCU_01406 [Strigomonas culicis] diamond 231 73.6 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Strigomonas Strigomonas culicis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;