RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1093008" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1093008 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27478395 27478395 PRJNA1093008_S_NODE_66583_length_269_cov_1.571429_g66256_i0 PRJNA1093008 66583 269 1.571429 4.22714401 Adineta steineri 433720 Rotifera other_Eukaryota 43.1 0.0383   NR CAF3928669.1 433720 g66256 i0 33.8 1.78438661710037 80 43 82.5 3 35 256 1043 1118 CAF3928669.1 unnamed protein product [Adineta steineri] diamond 480 43.1 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri
30636100 30636100 PRJNA1093008_S_NODE_52173_length_290_cov_1.774194_g51846_i0 PRJNA1093008 52173 290 1.774194 5.1451626 Adineta steineri 433720 Rotifera other_Eukaryota 43.1 0.0447   NR CAF3633767.1 433720 g51846 i0 39.6 2.97931034482759 48 23 43.4 1 27 152 314 361 CAF3633767.1 unnamed protein product, partial [Adineta steineri] diamond 864 43.1 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;