RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1093008" and tax_phylum = "Negarnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1093008 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27510086 27510086 PRJNA1093008_S_NODE_45063_length_303_cov_1.339130_g44736_i0 PRJNA1093008 45063 303 1.33913 4.0575639 Lepidopteran phasma-related virus OKIAV246 2746306 Viruses Viruses 97.8 3.53e-21   NR QMP82218.1 2746306 g44736 i0 44 0.99009900990099 100 56 99 0 2 301 1155 1254 QMP82218.1 RNA-dependent RNA polymerase, partial [Lepidopteran phasma-related virus OKIAV246] diamond 300 97.8 1 Viruses   Orthornavirae Negarnaviricota Bunyaviricetes Elliovirales Phasmaviridae   Lepidopteran phasma-related virus OKIAV246
27510087 27510087 PRJNA1093008_S_NODE_47483_length_298_cov_3.071111_g47156_i0 PRJNA1093008 47483 298 3.071111 9.15191078 Lepidopteran phasma-related virus OKIAV246 2746306 Viruses Viruses 114 5.3e-27   NR QMP82218.1 2746306 g47156 i0 61.6 0.996644295302013 99 38 99.7 0 2 298 176 274 QMP82218.1 RNA-dependent RNA polymerase, partial [Lepidopteran phasma-related virus OKIAV246] diamond 297 114 1 Viruses   Orthornavirae Negarnaviricota Bunyaviricetes Elliovirales Phasmaviridae   Lepidopteran phasma-related virus OKIAV246

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;